Silene latifolia (white campion): 141594221
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Entry
141594221 CDS
T11116
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141594221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141594221
Spliceosome [BR:
slaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141594221
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
141594221
NCBI-ProteinID:
XP_074270471
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Position
8:complement(25462406..25464256)
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AA seq
470 aa
AA seq
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MATLHDSFLADLDDLSDYGVDVEKMEEDIAGELVDIDKLNHDNLDNFSKLHKSQRFNAIL
RKIEQDGIISEDDPDDCRFIIDCNTLLVDIENEIIQIYNYIRDNYRLKFPELESLIHHPI
EYAVVVKKIGNETDLTNVQLDGLSPSDIMVITVTASTTGGKQLPEDVLQKTIEACDRAID
LDSARKKVLDFVESRMVYIAPNLSVIVGSAVAAKLIGTAGGLESLAKMPACNVQLLGAKR
KNLAGFSSATCRFHIGYLEQTEIFQNTPPGLKMRACRLLAGKSTLAARVDYIRSEPTGKT
GRSIREEICKKIEKWQEPPPARIPKPLPVPDAAPKKKRGGRRLRKAKERYAVTDMRKLAN
RMQFGVAEESSLGDGLGVGYGMLGQAGSGKLRMSAGPSKLLKVAKKSMKRYGSSSSTASG
LTSSLAFTPVQGIELANPEALARRLETGTQSTYFSETGRFSNIKSNYCKI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttcatgattcgtttttggcggatttagacgatttatcggattatggagtt
gatgtggagaaaatggaggaggatattgctggagagttagttgatatagacaaactgaac
cacgacaatcttgacaacttttcaaaactgcacaaatcacagcgttttaacgccatctta
cgaaaaattgaacaagacggaataatttcagaagacgatcctgatgattgtcggttcatt
atcgactgtaatacattactagtcgatattgaaaacgaaattatccaaatatacaattac
attcgtgacaattatcgcctcaaatttccagaactcgagtcactaattcaccatccaatc
gagtatgctgttgtcgtgaagaaaattggtaacgaaacagatttaaccaatgttcaatta
gacggtctttcgccgtctgatataatggttattactgtcactgcttcaaccactggcggc
aagcagctcccagaggatgttctacagaaaactatcgaggcatgtgatcgtgcaattgat
ctcgattcagcaagaaaaaaggtgcttgattttgtcgagagtagaatggtttatatagca
ccgaatctgtcagtaattgttggaagtgcagttgcagcaaagcttattggaactgccgga
ggtttggaatcacttgcgaagatgccagcgtgtaatgttcaacttcttggggcgaaaagg
aagaatctcgcaggattttcctcagcaacttgtcggtttcatattggttatcttgagcag
acggagatatttcagaatactccccctggtcttaaaatgcgtgcttgtcgtcttttggct
ggaaagtctacccttgcagctcgggtggattatataagaagtgaaccgactggaaagacg
ggaaggagtattcgagaagagatttgcaagaaaattgagaagtggcaagagccacctcct
gctagaatccctaaacctctaccagtgcctgatgctgcgccaaaaaagaagagaggcgga
aggagactgaggaaggcgaaggagagatatgctgttacggacatgagaaagttggcaaat
cggatgcagttcggagtggctgaagagagttcacttggtgatgggttgggagtaggatat
ggcatgcttggtcaagccgggagtggtaaattacgtatgtcagctggtcccagcaaactt
ttaaaagttgctaagaaatcgatgaagcggtatggtagtagtagtagcactgcctcaggg
ctaacatcgagtttggcatttactcctgttcaaggaatcgaacttgcaaatccagaggct
cttgctcgtcgacttgaaactggaactcagagtacttatttctctgaaacaggcagattt
tcaaacatcaagagcaactactgtaaaatctga
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