Silene latifolia (white campion): 141595849
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Entry
141595849 CDS
T11116
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141595849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141595849
04147 Exosome [BR:
slaf04147
]
141595849
04090 CD molecules [BR:
slaf04090
]
141595849
Enzymes [BR:
slaf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
141595849
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
141595849
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141595849
CD molecules [BR:
slaf04090
]
Proteins
141595849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_21
Zeta_toxin
ABC_ATPase
RsgA_GTPase
AAA_15
AAA_30
nSTAND3
Motif
Other DBs
NCBI-GeneID:
141595849
NCBI-ProteinID:
XP_074271903
LinkDB
All DBs
Position
8:109138198..109145151
Genome browser
AA seq
1231 aa
AA seq
DB search
MEENHKKEIFQNKDNKSIAKIFRYADKIDVLLMFSGTIGAIGDGMSTNCLLVFASKLMNS
LGFGQNQMSNASTYMSDVEKCSLYFVYLGLAVMVIAFMEGYCWSKTSERQVLKIRYKYLE
AILRQEVGFFDSQEATTSEIVNSISKDTSLIQEVLSEKVPIFLMHTSSFFSGIAFSAYFS
WRLSLVALPTIILLIIPGMIYGKYLMFLYKKSFKEYSKANVIIGEALSSIKTVYSFTAEK
TILEKYSLILERTMKLGIRQGVAKGVAIGSTGITFAIWAFLAWYGSRLVMYHGETGGRVY
AAGITFIMGGVSLGSALPEVRHFTEASVAATRILNRIDRTPKIDGEDTTGRVLDTIRGEI
QFEHVKFTYPSRLDTIILKDFDLKIEAGKTVALVGASGSGKSTAIALLQRFYDANEGFVK
IDGIDIRMLKLKWVRGQMGLVSQDHALFGTSIRENIMFGKLDATMDEVISAAQAANAHNF
IRQLPDGYETKIGERGALISGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQTA
LDQASLGRTTLVVAHKLSTVKNADIIAVINGGHIVEIGSHKDLMNQPNGHYARLAKMQKQ
LSCIDMDHNNTYEPNATSSVPRSVGRLSTRSSPAIFATPLPSFEMPQSSISHPPPSFFRL
LKLNSPEWKQGLVGSLSAVAFGAIQPTYALTIGSMISAFFVTNHEEMQSRIRRYAIVFSS
LSFFSITLNLCQHSSFGFMGERLTKRIRIKMLEKIFSFEAAWFDEEENSSGALCSRLSNE
ATMVKSLVADRVSLVVQTISAVTIAMVMGLVTAWKLALVMIAVQPLTILCFYTRKVLLSS
ITNNFVKAQNQSTQIAVEAVYNHRIVTSYGCVGKVMELFDLAQNEPRKQGRKKSWLAGIG
MGSAQGVTFMCWALDFWVGGKLVEKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDIAKG
SAAVASVFKILDKPSQISVSRTKLETLTGRIELKKVDFSYPTRPESLILREFSLEVKPGS
SVGLVGRSGCGKSTVIGLIQRFYDVDRGAVKVDGVDIREFDVVWYRNHMALVSQDPVIYS
GTIRDNVVLGKVDASENEVVEAAKAANAHDFICSLKEGYETECGERGVQLSGGQKQRLAI
ARAILRNPTILLLDEATSALDLHSEKLVQEALGRVMVGRTTLVVAHRLNTIKTLDTIAFV
QDGKVVECGTYTQLKHNRGAFFNLASLQNLT
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatcacaaaaaagagatttttcaaaataaagataacaaatctatagctaaa
atttttcgatatgcagataagatcgatgttctcctaatgttttcgggtactattggtgct
ataggtgatggaatgtctacaaattgcctactagtctttgctagcaagcttatgaatagt
ttaggttttggacaaaatcaaatgagtaatgctagcacttacatgtccgatgttgaaaag
tgtagtttatacttcgtgtacttgggattagcagtcatggtgatagctttcatggagggt
tattgttggagcaaaactagcgaacgacaagtactaaaaattcgatacaaatatttggaa
gccatacttagacaagaagttgggttttttgattcacaagaagctaccacttcagagatt
gtgaatagcatttctaaggatacttctctcattcaagaggttctaagtgagaaggttcca
atattcttgatgcacacatcatcattcttctcaggaattgcattttctgcatacttctca
tggagactatcacttgtagccttaccaacaatcatactactaataatcccaggaatgatt
tatggcaaatacctaatgtttttgtacaagaaatccttcaaagaatatagcaaagcaaat
gtgataataggagaggccttaagctctattaaaactgtatattccttcactgctgaaaaa
accattctagagaagtactctcttatcttagaaagaacaatgaaactcgggattcgacaa
ggggttgctaaaggagtcgcgattggaagtaccgggatcacatttgcaatatgggctttt
cttgcttggtatggaagtcgtttggtcatgtatcatggtgaaactggtggtagagtttat
gcagctggcattacatttattatgggaggagtatcactaggaagtgcacttcctgaggta
agacacttcacagaagcctcagtagcagcaacaaggatactcaacaggattgatcgaaca
ccaaagattgatggtgaggacactacaggtcgtgttctagacaccattcgcggtgaaata
caattcgagcatgtaaaattcacatacccatctcgccttgatacaataatcctcaaagat
tttgacctaaaaatcgaggcagggaaaactgtggcccttgtaggagcaagtggaagtgga
aagtcgactgcgattgctctacttcaaaggttttatgatgctaatgagggttttgttaag
attgatgggattgacataagaatgcttaagttgaaatgggttaggggacaaatggggctt
gttagtcaagatcatgcattgtttgggacatcaataagggagaatatcatgtttggtaag
cttgatgcaaccatggatgaagttataagtgctgctcaagctgctaatgctcacaatttt
attagacaacttcctgatggatatgagaccaagattggtgaaagaggagcacttatatca
ggaggtcaaaagcaaaggattgcaatagcaagggcaatcattaagaacccagtgatactc
cttcttgatgaagccacaagtgcacttgattccgaatccgaaactctagtccaaactgct
cttgatcaagcatcccttggaagaactactttggtagttgcacacaagctctcgacggtg
aaaaatgccgatataattgcagtgatcaatggtggtcatattgtagagataggatcacac
aaagaccttatgaaccaaccaaatggtcattatgcaagattagctaaaatgcaaaaacaa
ctaagttgcattgacatggaccataacaatacctatgaaccaaatgccacatcttctgtc
cctagaagtgtaggtaggctaagcacaaggtcaagtcctgcgattttcgctaccccatta
ccgagttttgagatgccacaatcctcgatttcacatcccccaccttcctttttccgactt
cttaaacttaactcccctgaatggaaacaaggcttggttggtagtctctcggccgtggcc
tttggagcaatacaacccacctatgcattgacaatagggtctatgatctcggccttcttt
gtaacaaaccacgaggagatgcagtcgcgtatcagaagatacgcgattgttttctcctcg
ctttcatttttctcaataacattaaatctttgtcaacattcgagttttgggtttatggga
gagcgccttactaagagaattcggattaagatgcttgagaagatttttagttttgaggct
gcttggttcgatgaggaggagaactctagtggggccctatgttcgaggctaagcaacgag
gcgacaatggttaagtcattagtagctgaccgtgtttcactcgtggttcaaaccatctca
gcagtgactatagccatggtaatgggcttagtcacggcttggaaactcgcgcttgtaatg
atcgcggttcagccacttactatcctatgtttctacacaagaaaggtgcttctttctagc
ataaccaataacttcgtcaaggcgcaaaatcaaagcactcaaatagccgtagaggcggta
tataaccataggatagttacttcctatggttgtgtaggaaaagtgatggaattgttcgat
ttagcgcagaatgaaccgagaaaacaagggaggaaaaagtcttggttagccgggattggg
atgggttcggctcaaggggtcacattcatgtgttgggcattggatttttgggttggtggg
aaattagtcgaaaaaggcgagatttcagcaggggatgtgtttaagacatttttcgtgttg
gttagtacaggtaaggttattgcagaagccggaagtatgacttctgacattgctaaggga
tctgctgctgtcgcatctgtgttcaaaatcttagacaagccgtcacaaatttcagtttca
cgtacaaagctagaaactttgacaggaaggatagagctaaagaaggtggatttttcatac
ccgactagacccgagagcctgatcctgcgagaatttagcctagaagtgaagccgggttcg
agtgtagggctagttgggagaagtgggtgtgggaaatcaacagtgataggactaatacaa
aggttttatgatgttgatagaggtgcagtaaaagttgatggtgttgatataagagaattt
gatgttgtctggtatagaaaccatatggctttggttagtcaggatccggttatttattcg
ggtaccattcgagataatgtggttcttggtaaggttgatgcttctgagaatgaagttgtt
gaagctgccaaggctgctaatgctcatgatttcatttgctcccttaaagaagggtacgag
acggaatgtggcgagcgaggagtacaactatcaggaggtcaaaagcagagattagcaata
gccagagcaattctcaggaatccaactattttattacttgatgaggcaactagtgctttg
gatttgcactcggagaaattggttcaagaagcattgggtcgagtcatggtgggacggact
actctcgtagttgctcaccgactcaacaccatcaagactctcgacacaattgcctttgtc
caggatggcaaagtcgttgagtgtggcacatacacccaactgaagcacaaccgtggcgct
ttcttcaaccttgctagtcttcagaaccttacttaa
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integrated database retrieval system
