Silene latifolia (white campion): 141595997
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Entry
141595997 CDS
T11116
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141595997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slaf04040
]
141595997
Ion channels [BR:
slaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141595997
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
141595997
NCBI-ProteinID:
XP_074272088
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Position
8:complement(2382251..2389792)
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AA seq
672 aa
AA seq
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MPSLLPLTELATPKQDRPIRGAVRSTQGFKRLMPYHQYARNRAAIHQSEILDPQDWFLHR
LNKIFLISCVWSVAFDPLFFYIPIIDGKNKCIKLDSTLKVIACVLRTLNDLFYLLRIILQ
FRTGFIAPSSRVFGQGELIKDPSAIAKRYVYSYFFVDLLAVLPFPQLSFFIPMVNGHVTL
MGLLKVVIFSQYVPRFLRIYPLFKEVRRASGVITKTAWAGASSNLLVYMLFSHVVGAMLY
TFAIDRQSKCWHEACLDKGCYHLSVYCKDLMFRRNRTFNEAHCSLVDPDQITSSTSFNFG
MFYDAIQSKVVESNAFFPKLSYCFWWGLQNLSSLGQNLKPTAVTEENLFAAFICIFGLFL
FSLLIGNMQQYLQSTTVREEKLRERRRDAERWMSDRLLPENLRSRIRKYNQYKWQKTRGF
DEEVIIRNFPKDLRRDIKRHLCLSLLMRVPIFKHMDEKLMDSLCDRLKPVLYTKGNYIVR
EGDPVEEMLFITKGSLTMTTNDGRTGFFNSVSLIVDDFCGDELVTWALDRHSSSNLPIST
RTVQSKTEVEAFALLPDDLKFVASEIHRLYSKHILRSYSPRWRTWAASFIQVEWRRYYRK
KLEKRLQEAAYDALAEQGESSTSLGTAILVSRFATNALRSLRRNSLENDRPYQRKSLNLQ
KPTDPDFVSNDC
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcttttgccgcttactgaacttgctactccaaagcaagacaggcctatcagg
ggagctgttagaagcacccaagggtttaaaaggcttatgccgtatcatcaatatgcaagg
aatcgtgctgctatacatcagagtgaaattctcgaccctcaggactggtttcttcatagg
ttaaacaagatatttctgatctcatgtgtatggtctgtagccttcgacccattatttttc
tacattccgattatagatggcaagaacaagtgcatcaagttggattctacgttgaaagtt
atagcctgtgttcttcgcaccttaaacgacttgttctatctacttcgtataatcttacag
tttcgtactggctttattgctccttcttctcgggtatttggccaaggtgaattaatcaag
gacccttcagccatagcgaaaagatatgtctactcatacttctttgttgacctcttagcc
gtgctgccctttcctcagctgtcatttttcataccgatggttaatggtcatgtgacttta
atgggccttctgaaagtagttattttcagccaatatgttccgaggttccttcgaatttat
cctttattcaaggaagtgaggagggcatcaggagtaatcactaaaactgcttgggctgga
gcttcttcaaatcttttggtttacatgctttttagccatgttgtgggagcaatgttgtat
acctttgcaatagatcggcagagcaagtgctggcatgaggcatgtctagataaagggtgc
tatcacctctctgtatattgcaaggaccttatgttcagaagaaatcgtacgttcaacgaa
gcacactgcagcctcgtagatcccgatcaaataactagttctacatccttcaactttggc
atgttttatgacgccattcaatctaaagtagtagaatccaatgccttctttccgaaactc
tcctattgcttctggtggggacttcaaaatcttagctctctcggtcaaaatctaaaacca
actgcagtcactgaggaaaacttatttgctgccttcatttgcatcttcggcttgttcttg
ttctcattgctcattgggaatatgcagcaatatctacaatctacgacagtcagagaagag
aaactaagagaaagaaggcgggatgcagagcggtggatgtctgatcgtttgcttccagag
aacttgaggagcaggattagaaagtataaccaatataaatggcaaaaaacaagaggtttc
gatgaagaggttatcatccgtaattttcctaaggacctcaggagggacattaagcggcat
ttgtgcttgtctcttctaatgagagtgccaatattcaaacatatggatgaaaagttgatg
gattcattgtgtgaccgtttgaagccggtcctttataccaagggaaactacatcgtacgt
gagggtgatccagttgaagagatgctctttataactaaagggagcctaactatgaccact
aatgatggaagaaccggcttctttaattccgtgtctctcattgttgatgatttctgtgga
gacgagttggttacatgggctctagaccgtcactcctcatccaaccttcctatttcaact
aggaccgtgcagagcaaaacagaagtagaagcctttgcactattacctgacgatctgaag
tttgtggcatcggaaattcataggctttacagcaagcatatccttaggtcctactcgcca
cggtggagaacatgggcagccagtttcatacaggtggaatggcgaagatactacagaaag
aagctcgagaaacgtttacaagaggctgcatatgatgctttggccgagcagggtgaaagc
tcaactagccttggcacggcaatactcgtgtcgaggtttgctaccaatgcactacgaagc
ctgcgacgtaatagtcttgagaacgatagaccgtatcagaggaaatcactaaacctgcaa
aagccaacagatccggatttcgtttccaatgattgctaa
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