Silene latifolia (white campion): 141596036
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Entry
141596036 CDS
T11116
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141596036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141596036
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141596036
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_6
Motif
Other DBs
NCBI-GeneID:
141596036
NCBI-ProteinID:
XP_074272135
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Position
8:complement(3234148..3239186)
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AA seq
588 aa
AA seq
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MLDSKKIKKSYDLDENSQRISSFPDEVLENVLGMLESNKDRSSVSLVCKDWYNAERWSRT
HVFIGNCYAVTPEIVARRFPNIRSVILKGKPRFSDFNLVPDNWGADIHPWLVCFHKVYPF
LEELRLKRMSICDESLEFLAMSFPLFKRISLLSCDGFSTDGLAAVATHCKNLVELDIQEN
GIDDRSGSWLSCFPENFTSLEILNFSNLNSEVSFASLERLVARCKSLRTLKVNKNITLEQ
LQRLLVHTPWLAQLGTGSFSQELHLSQYASLESVFNNFRNLQTISGLWDANSVYLPVIYP
ACSMLTFLNLSDAALQCDELAQLLAHCPNLRRLWVLDTVGDKGLETVGSNCPLLEELRVF
PASPFEAEIDHGVTESGFVSVSYGCPKLKCVLYFCRQMTNAAVATIVKNCPEFTHFRLCI
MNPGQPDHLTNEPMDEAFGSVVKGCKKLRRLAVSGLLTDLTFEYIGKYAKNLETLSVAFA
GSSDRAMQCVLSGCPKLRRLEIRDCPFGNSALLSGLERYESMRSLWMSACNVTMSACELL
AKEMPRLNVEVINDESTDECIDCHADKVYVYRSVAGPRKDAPPFVLTL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttagattcaaaaaaaataaaaaaatcatatgatttagatgaaaatagtcaaagaata
tcatcatttcctgatgaagtattggaaaatgttttaggaatgttggaatcaaacaaagat
agaagttcagtttcattagtttgtaaagattggtataatgctgaaagatggagtagaaca
catgtgtttattggtaattgttatgctgttacacctgaaattgttgctagaagattccca
aatattaggagtgttattttaaaaggaaaacctaggttttctgattttaatttagttcct
gataattggggtgctgatattcatccttggcttgtttgttttcataaagtttacccattt
cttgaggaacttagattgaaaagaatgagtatttgtgatgaaagtttggagtttttagct
atgtcttttcctttgtttaagaggatttctcttcttagctgtgatggattcagtactgat
ggtcttgctgctgttgccactcattgcaagaacttggttgagctggacattcaggaaaat
gggattgatgaccgtagtggcagctggttgagttgttttccggaaaacttcacgtcactg
gaaatattaaacttttccaatctcaactctgaagtaagctttgcgtcccttgaaagactt
gttgctaggtgcaaatctttaaggactttgaaggtcaacaaaaatattaccttggagcag
ttacaaaggttacttgtccatactccgtggttggcacagcttgggacgggttccttctca
caggagctccacctttcccaatatgcgagcctggagagtgtatttaataacttccggaat
cttcaaactatctctggattgtgggatgccaattcagtctatctgcctgttatttatcct
gcatgctcaatgctgacatttttgaatctgagcgatgcagctctgcaatgcgatgaactt
gctcaacttcttgctcattgtccgaatcttcgccgactttgggtgctggatactgtggga
gataaaggtttggaaaccgttggatctaactgcccgttactagaagaactacgagttttt
cccgcaagtccctttgaagcggaaattgatcacggggttactgagtcgggttttgtttcc
gtttcatatggatgccctaaactcaaatgtgttctctatttctgccggcaaatgacaaat
gctgctgtagcaaccattgtgaaaaactgcccggaattcactcattttcgcctgtgcatc
atgaacccgggtcaacccgaccacttaaccaatgagccgatggacgaggctttcgggtct
gttgtcaaaggttgtaagaagctcagaagactagccgtttctggtttgttaaccgacttg
acctttgaatacattgggaagtatgcaaagaaccttgagactctctcagttgcttttgct
ggaagtagtgaccgagcaatgcaatgtgttctttcgggttgtcctaagttgagacggttg
gagataagggactgcccattcggtaattctgcccttctttcaggattagaaagatatgag
tcgatgagatctctctggatgtcggcatgcaatgtaacaatgagtgcatgcgaactattg
gctaaggaaatgcctaggttgaatgtcgaggttatcaatgatgaaagtactgatgaatgc
attgactgtcatgccgataaagtttatgtctatcgttcggtggctggaccgagaaaagat
gctccgcctttcgtcctcacactttga
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