Silene latifolia (white campion): 141596064
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Entry
141596064 CDS
T11116
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141596064
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141596064
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141596064
Protein phosphatases and associated proteins [BR:
slaf01009
]
HAD phosphatases
Fcp/Scp phosphatases
141596064
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141596064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
141596064
NCBI-ProteinID:
XP_074272184
LinkDB
All DBs
Position
8:3819972..3829921
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AA seq
1005 aa
AA seq
DB search
MMKTVIYDEEGKIIGELEAYFDEYKYANSFEVVELLRDGLKIREISKSGERCHPLAVLHT
ISSENCSFSGVCFKLIEYKSPLFHLQQQEHPHDTQLFGLHSTCLRENKTVVVPFGDEDIH
FVAMRSRRMDKTACFWGFSLTRGLYEACLDMLNLRCLGIVFDLDETLIVANTLRSFEDRI
EALQRKLIVEIDSQRIAGMTAEVKRYQEDKAILKQYAETDQVVDNGKVHKIQAEVVPALS
DNHQTIVRPLIRLPDKNIVLTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVC
TMAERDYALEMWRLLDPDSNLISTTEVLDRIVCVKSGSKKSLFNVFHDGICHPKMGLVID
DRLKVWDEKDQPRVHVVPAFAPYYSPQAEANNAIPVLCVARNVACNVRGGFFKEFDDVLL
PRINEVHFEDNPKDVPIPPDVKNYLVAEDDGSGSNGNKELGFDGMADAEVERRLKEAALV
STAFPSAPSPASVTLDPKLASSLPFTMAVPSMAIPQPTAQASLTPFLTNLFSQAGPLVRP
LNSIGPPELGLHNSPAREEGEVPESELDPDTRRRLLILQHGHDFRETLPNEAQFPVRSPL
QAPVAGHMPGPLPLAGPGPGPGPVPIQAPGPGSSPVSVPRVQSRGSWFPVEGHMSPGPMS
RPGPKEYPIGPDSGYIEKQRPPPFQRRVDSSVRSNRPFPEKLRPAREAPQRDDRLRSSHS
LPGHQSFKGDDISLSRSSSIKDSEVVPKRGSSFPETPSGALYDIAAKVGAKVEFKTGLVR
STELRFLMEAYFSGERVGEGTGVKRKEAQYRASEAALMNLADRYLTHIKSDSSTPQSDTS
RGQSPNNIRNPSDSHSPGDRPVTKEETSPSVEPTKPDDSNVDDSKDSASSVSALKELCMK
DGLSIDFRAPSPSSTSTNQGDQVHVEVTIDGKVLGQGTGLTWDEAKIQAAEKALASLKSM
PSQLKRPGSPRSLQVTTNKRYKAEYPQVYQRMPSSRNPRNASPVL
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacagtgatttatgatgaagagggaaaaataattggagaattagaagcatat
tttgatgaatataaatatgcaaattcatttgaagtagttgaattattgagggatgggttg
aagataagagaaatatcaaagagtggtgaaagatgtcatccacttgctgtacttcataca
atttcatctgaaaattgtagtttttctggagtttgcttcaaattgattgaatacaagtca
ccattatttcatctacaacaacaagaacatcctcatgatacacagctttttgggttgcat
tctacctgtctcagagaaaacaagactgttgttgtgccctttggtgatgaggatattcat
tttgtggcgatgcgttctagaaggatggacaaaaccgcttgcttttggggtttcagtctt
acccgagggttatatgaagcatgccttgacatgttaaatcttagatgtcttggcattgtt
tttgaccttgatgagacactgatcgttgcaaacacgttgcggtcatttgaggataggatt
gaggccttgcaaaggaaacttattgtagaaattgactcgcaaagaattgcgggtatgact
gctgaagtgaaacgttaccaggaggacaaggctatactaaagcagtatgctgaaactgat
caagtggtggacaatggtaaagttcacaaaattcaagcagaggtggttccagcgctctcg
gacaatcaccagactattgttagacctcttatacggttaccagataaaaacattgttctt
actcgaataaatccacagattcgtgatacaagtgttcttgtaagactgagacctgcatgg
gaggaactacgcagctacttaactgccagaggtcgtaaacgttttgaggtttatgtttgt
acaatggctgaaagagattatgctttggaaatgtggagacttctagatcctgactccaat
ttgataagtacaacagaagttttggatcgtattgtgtgtgtcaagtccggatcaaagaag
tcgctatttaatgttttccatgatggcatttgtcatccgaaaatgggtttggtgatcgat
gatcggttaaaggtgtgggatgagaaagatcagcctcgagtgcatgttgttcctgcattt
gctccatattattcaccccaggcggaggcaaataatgccattccagttctctgtgttgct
agaaacgtagcgtgcaatgttcgaggtggctttttcaaagaattcgatgatgttctcttg
ccacggattaatgaagttcattttgaagataatccgaaagatgtcccaattcctcctgat
gtcaaaaattatttggtggccgaggatgatggctctggttccaacgggaataaagaactc
ggttttgatggaatggcagatgcagaggttgaaagaaggctcaaggaagcagctttagtt
tcaacagcattcccttctgcaccttctccggcaagtgttactcttgatcccaaactggcg
tcttctctgccattcacaatggctgttccttccatggcaatccctcagcctaccgctcaa
gcatcattgacacctttccttactaacttgttctctcaagcaggaccgttagttagacca
ctaaatagtattggtcctccagagctagggttgcacaattcccctgcgcgagaagaaggt
gaagtacctgaatctgagcttgatcctgatacaaggaggcgacttctcatattgcagcac
gggcatgattttagagaaaccttaccaaatgaggctcagtttcctgttagatctccactt
caagcacctgtcgcaggtcatatgcccgggccactgcctctcgcaggtccgggtccgggt
ccgggtccagttccaattcaagctcctggtcctgggtccagtcctgtttctgttccacgg
gtgcaatcacgagggagctggtttccagttgagggtcacatgagcccaggaccgatgagt
agacccggacctaaagaatatcctattggtcctgattctggatatattgaaaagcaacgg
ccacctccttttcaacgaagggtggatagttctgttagatcaaatcgaccttttcctgaa
aaactgagaccggcgagggaggctcctcaaagagacgacagattgagatcaagtcactca
ctacctggccaccagtcatttaaaggtgatgacatctccttgagtagatcatcaagcatc
aaggattctgaagttgtgcccaaacggggtagttcgtttccagaaactccttctggtgct
ttatatgatatagcagcgaaggttggagcgaaggttgaatttaaaacaggattggtccgt
tccacagagttgaggttcttaatggaggcttatttttctggggagcgtgttggtgaagga
actggtgttaaaagaaaggaagcccagtatcgcgcttcagaagctgctttgatgaatctg
gctgatagatacttgacccacattaagtcagattccagcactccacaaagtgacacaagt
cgtggtcagagtcccaataacatcagaaatccaagtgattcacattctcctggtgatcga
cccgtaactaaagaggagacatcaccttcagttgagccaactaaaccagatgactctaat
gtcgatgattctaaggactctgctagttcagtatctgctcttaaagaattgtgcatgaag
gacggactcagtattgattttagagctccgtctccatcttctactagtaccaaccaagga
gatcaagtacatgtagaggtgacaatagatggtaaagttctaggccaaggcacaggatta
acgtgggacgaagcgaagattcaggctgctgagaaagctcttgcaagtcttaagtccatg
cctagtcaattgaaacgtccgggatctccaaggtcattacaagtgacgacaaacaaacgt
tacaaggcagaatatcctcaggtttatcagcgaatgccatcttcaaggaatcctaggaat
gcatctcccgtgctttga
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