Silene latifolia (white campion): 141596242
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Entry
141596242 CDS
T11116
Name
(RefSeq) small RNA 2'-O-methyltransferase-like
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141596242
Enzymes [BR:
slaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
141596242
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141596242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
FKBP_C
DSRM_2
Methyltransf_31
Methyltransf_12
Methyltransf_23
Methyltransf_11
dsrm
Methyltransf_25
Dicer_dimer
Methyltransf_32
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
141596242
NCBI-ProteinID:
XP_074272440
LinkDB
All DBs
Position
8:7987291..7996585
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AA seq
928 aa
AA seq
DB search
METENPPVAVKKQTLTAKAIIHQKYGTKACYKIEEVEEKLSSNVLCPGLTLPQKGPSLFR
CFLQLPDISVVSEPCKKKKDAQQSAAQLALVKLGIDSESSSPTDAVDELVSRLTYMFSNE
FLSSLHPLSGHLKAVLRRDDKRCGLLPLYAVISCDPKLVNLCKSIDARVEANPLLSIPIV
KGAVARLSELVISEEELWIKRKEPYPSDVIPSLDNQESDITNGAVTVTKAVYIPPSLDKD
VVSLSLNMGSEVYYLDIIAQELGVVDASKVLISRTIGKSSSEMRLYFSALEPKNLISDPE
FHSAKDVSSDSSFNVRASYLLGQHVYGNVILASVGYTWRGAELFHEDVSVRSYFRMLVGK
TPDGIFKLSRDAILAADLPQLFTTKTNWRGSLPRDLLCAFCRQHRLSEPVFTLVCNSLKS
DKELHESENGQTSPEIETFRCNIKIFSKTQELILEYFPEESFKKQGDSMQNASLKALLWF
NIYFKQPNADLEKLSLSSVSNELNCNLTSFVKEFYFCQLMHEAQQPRDVIGGRKRNREPQ
SDLINKNPRMEGEVSGSSPSIGSVVSISYTVYLVSEGTEIRELLEKNDDFEFEIGAGAVI
SNIESAVTQMTVGQSICFYMGLPPKEFILASAVEYERVLSLLSSSPCCLEYTTSLLQVTE
PFEDRMEQALFSPPLSKQRLEFAMHYIKEFSAASLIDFGCGSGSLVDSLIDIPSSLEKIV
GVDLSQKGLVRAAKVLNSKLEKLKTVMPTSRIESVTLYDGSITVFDSRLYGFDVGACLEV
IEHMEEDQACLFGDVALSLFRPKLLIVSTPNYEYNIIMQKSNLATQEEDPDEKGGAQPCK
FRNHDHKFEWTRQQFNQWATALALRHNYSVEFGGVGGDGSEPGYASQIAVFRIRNDSSVE
VSGPTVEVDHHYKTVWEWNAATTENPAE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaaaatccaccagttgcagtaaaaaagcaaactttaacagcaaaagcaata
atacaccagaaatatggcacaaaagcatgctataaaatcgaagaagttgaagaaaaactt
tcttcaaatgttttatgtcctggtttaactcttcctcaaaagggtccttctctttttcgc
tgtttcttacaacttcctgacatttctgttgtttctgaaccttgtaagaagaaaaaagat
gctcaacaatctgctgctcagttggctttagtaaagcttgggattgattctgagtcaagt
agtccgacagatgctgtggatgaattggtatctcgtcttacgtatatgttttcaaatgag
tttctatcatcacttcacccattgagtggtcacttaaaagcagtgttacggagagacgac
aaacgttgtggcttgcttcctttatacgctgtaatttcttgtgatccaaagcttgtaaac
ttgtgcaaatccattgatgcaagggttgaggcaaatcctttattgtctatccctattgtg
aaaggagctgttgccagattatcagaacttgttatttccgaggaggagctttggattaag
aggaaggagccttatccttcagatgttataccatctttagacaatcaagagtcagatata
accaatggggctgttacagttaccaaggcggtgtatattccaccttcacttgataaggat
gtagtctccttaagtctgaatatgggttcagaagtttattacctggatattattgcacaa
gagctcggtgttgttgatgcctcaaaagtcctcatctccaggacaattggcaaatcatct
tctgaaatgagattgtatttttctgctctggaacccaaaaatttgatttcagatccagaa
ttccatagcgcaaaagatgtatcttctgatagttcctttaatgtacgtgctagttacttg
ttgggccaacatgtttatggcaacgtaattttagcttctgtgggatacacatggagaggt
gctgagctgttccatgaagatgtatctgtacgttcctatttcaggatgcttgttggcaaa
acccctgatgggattttcaagttatccagagatgcaatacttgctgccgatttgcctcag
ctatttaccactaaaacaaactggagaggctctttaccgagagatcttctatgtgcattc
tgccgccaacacaggctgtcggaaccggttttcactcttgtctgtaactccttgaaatct
gacaaagagttgcatgaatctgaaaatggccagacctcacctgaaatagaaactttcaga
tgcaatattaaaatattctctaaaacccaggaattaattcttgaatattttcctgaagaa
tctttcaagaaacaaggggattcaatgcagaatgcttctttgaaagctcttttatggttt
aacatttacttcaagcaaccaaatgcagatttggagaagttgtctttatctagtgttagt
aatgaactcaactgcaacttgacttccttcgtgaaagagttttatttctgtcaactgatg
cacgaagcccagcagcctcgcgatgtaattggaggccggaaaaggaaccgagaaccacaa
agtgaccttataaataaaaatccaagaatggaaggggaagtgtctggatcatcaccatct
attggatctgttgtctctataagttatactgtatacttggtttcagaaggaactgaaatc
cgagaattgctagagaagaatgacgattttgaatttgagattggggcaggagcagtgatc
tctaacattgaatcagctgttacacagatgaccgtgggacaatccatttgcttttatatg
ggcttgccaccgaaggaatttatcctagcttctgctgttgaatatgagagagtcctttct
cttttgtcctcaagtccttgctgcttggaatacaccacaagtcttctgcaagtaactgaa
ccattcgaagacagaatggagcaagcactttttagtcctccactatcaaagcagcgtttg
gaattcgcaatgcattacattaaagaattttcggctgctagcttgattgattttggatgt
ggatctggaagtttagtagattccttaattgatattccaagctccttggaaaagattgtt
ggtgttgatctttctcagaagggtctcgttcgtgctgccaaagtccttaattcaaaactc
gagaagctgaaaactgtaatgcccacgtcaaggatagaatccgttactctgtatgatggg
agcattactgtatttgactcccgcttgtatggatttgacgttggtgcatgcttagaggta
atcgagcatatggaggaagaccaagcatgcttatttggtgatgttgctctgtcattattc
cgtcccaagttgctgattgtttcaaccccaaactacgaatacaacattatcatgcaaaag
tccaatctagcaacccaagaggaggacccggacgagaagggcggagcccaaccgtgtaaa
tttcgaaaccatgaccacaagtttgagtggacaaggcaacagtttaatcaatgggcgact
gccttggctttgagacacaattacagtgtcgaatttggtggtgtaggaggagatgggtcg
gaacccggatacgcttctcagatagcggtcttcaggattcgcaatgactcgtccgttgaa
gtatctggaccgactgtcgaggtggatcaccattacaaaactgtgtgggaatggaatgct
gctactaccgaaaatccagctgagtga
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