Silene latifolia (white campion): 141596397
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Entry
141596397 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141596397 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141596397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141596397
03012 Translation factors [BR:
slaf03012
]
141596397
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
141596397
Translation factors [BR:
slaf03012
]
Eukaryotic type
Release factors
141596397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
141596397
NCBI-ProteinID:
XP_074272635
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Position
8:11657173..11670204
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AA seq
510 aa
AA seq
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MDITEDIRALQLDSFVEDDCLISEEESNVQEVDNVVQMEKDTKESHDDSAPMDSTERQEV
PTHEANEAVNDIAEPARKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDERTIQKYEKEAK
DKARDSWYMAYIMDTNEEERTKGITVEVGRAHFETETTRFTILDAPGHKSYVPNMISGAS
QADIGVLVISARKGEFETGFEKGGQTREHVMLAKTLGVTKLLVVVNKMDDPTVNWSKERY
DEIESKMIPFLKSSNYNVKKDVLFLPISGLLGTNLKVRVDKNVCPWWSGQSLFEAMDVIE
GPVRDPDGPLRMPITDKFKDMGTVVMGKIESGTMREGMSLIIMPNKAHVKVTAIYIDDIE
KKVKYADPGENIRVRLSGIEEEDILPGFVLSCISKPVAAVNEFNAQLQILELLENAIFTA
GYKAILHIHSVVEECEIVDLLKQTDPKTKKPMKKKPLFVKSGAVVLCRIRANNLICVEKF
SDFPQLGRFTLRTEGKTVAVGKIIEFPSVA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggatattactgaggatattcgggcgttgcagcttgactcctttgtagaggatgattgt
ctcatcagtgaggaggagtctaacgttcaagaagttgacaatgtggttcaaatggagaaa
gatacaaaggagtctcatgatgactcagctccaatggactcgacagagaggcaagaagtc
cctacccatgaagcaaatgaagcagtgaatgacattgctgagcctgcaaggaaacgtcat
ctaaatgttgtgtttattggtcatgttgatgctggtaagtcaacaattggtggtcagata
cttttcctcagtgggcaggttgatgagcgtacaatccagaagtatgagaaagaagccaag
gataaagccagggacagttggtacatggcatacatcatggatactaatgaagaagaacgt
actaagggcatcactgttgaagttggtagagcgcattttgagactgaaacaactaggttt
acaatcttggatgcaccgggtcataaaagctatgtaccaaatatgatcagtggcgcatca
caagctgacataggcgttctggtaatttctgctcggaaaggggagtttgaaactggattt
gagaaaggtggacagactcgagaacatgtcatgcttgcaaaaaccctgggtgtcactaaa
ctcttagttgtggttaacaagatggatgatcctactgtcaactggtcaaaagaaaggtat
gatgagatagagtctaagatgattccttttctgaagagctcaaactacaatgtcaaaaaa
gatgtcctgtttcttccaatatctggactactcggaacaaacttaaaggtgagagtcgac
aaaaatgtatgcccatggtggagcggtcaatctctttttgaagcaatggatgttattgaa
ggccctgtacgagatcctgatggtccccttaggatgcccattaccgataaattcaaagat
atgggaactgttgttatgggtaaaattgaatctggcactatgcgtgagggtatgtcattg
atcattatgccaaacaaggctcatgtgaaggttaccgctatttatattgatgatattgaa
aagaaagtcaaatatgctgatccgggtgaaaatatacgggttagattgtcagggattgaa
gaagaagatatattgccaggctttgtcttgtcatgcatttccaagccagttgcggctgtt
aatgagtttaatgctcagttgcaaatccttgagctacttgaaaatgctattttcacagct
ggatacaaggcgatcttgcacattcattccgttgttgaggaatgtgagatagttgatctg
ctaaagcagactgatccaaagacgaagaaacccatgaagaagaagcctctttttgtcaag
tctggggctgttgttttatgccgtattcgggcgaataatttgatatgcgtggagaagttt
tctgatttcccacagcttgggaggtttactcttcgtacagaagggaaaactgtggcagtg
ggaaaaataattgaatttccttcggttgcttaa
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