Silene latifolia (white campion): 141596440
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Entry
141596440 CDS
T11116
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
141596440
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
141596440
NCBI-ProteinID:
XP_074272701
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Position
8:14483100..14487732
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AA seq
711 aa
AA seq
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MSSKKGCSIVWLRRDLRVEDNPALAAGVRAGAVICVFVWAPEEEGHYYPGRVSRWWLKHS
LLQLDTSLRTLGTFLITKRSYDSVSSLLEVIKSTGATQLFFNHLYDPLSLVRDHRAKEVL
TAHGIAVRSFNADLLYEPWEVLDDQRQPFNTFASFWDKCLNMPFDPEAPLLPPKRIISGD
LSRCPSDTLVFEDESEKGSNALLARAWSPGWSSADKALTTFINGALIEYSKNRRKADSAT
TSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNTQGDESCNLFLKSIGLREYSRYMSFN
HPYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDSRELDRIDNPQFEGYKF
DPNGEYVRRWLPELSRLTTEWIHHPWDAPESVLQAAGVELGSNYPLPLVKLDAAKDRLQQ
ALSDMWEQEAAHRAAIENGIEEGLGDSADSEPIAFPQDLQMDVDHDPPRNDTQAPNNNNN
NNNNNNNNNIRRFQDQMVPSITSTYFRVDDEETSSDLRQPSVGDGRAEVPRDVVVNQEDP
VIPDPNPGISVAARRNNITFAVQNVEEYGAESSSTSGGSRGERSSGVVPVWSPATSSFSD
QFMSDDAGMGPGSGFLQRHPQSHQLVNWRRLSQTGTMPEKEKKETFTEKKD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaagaaagggtgtagtatagtatggttaagaagggatctaagagtagaagat
aacccagcattagcagcaggagtaagagcaggagcagtaatttgtgtatttgtatgggca
cctgaagaagaaggacattattatcctggtagagtatcaagatggtggcttaaacatagt
ttattacaacttgatacttctttaagaactcttggtacttttcttattaccaagagatct
tatgatagtgtttcttctttacttgaggttattaaatctactggggccactcaactcttc
tttaatcacctatatgatccgctgtcacttgtgagggatcatcgcgccaaggaagtttta
actgcacacggaatagctgtgcgttccttcaatgcggatttgttgtatgaaccatgggaa
gttttggatgatcaacgccagccatttaataccttcgcatctttctgggacaaatgcctt
aacatgccttttgatcctgaggctccacttcttcctcctaagagaataatctcaggagat
ttgtcacggtgcccatcagacacattagtatttgaagatgaatcagaaaagggaagcaat
gctctgctagctagagcatggtcacccggttggagtagcgctgacaaggctctaacgact
ttcatcaatggcgcattaattgagtactcaaagaacaggagaaaggccgatagtgcaaca
acctcctttctttctccccatttgcattttggggaagtcagtgtaaggaaggtcttccat
ttggttcgcataaaacaggtctcttgggcaaatgaaggcaacacacaaggagacgaaagc
tgcaatttgtttctcaaatcaatcggtttgagagaatactcaagatacatgagcttcaat
catccttatagtcacgagaggccgttactggggcacctcaaattcttcccttgggtagtt
gatgaaggctatttcaaggcatggagacaaggtcggaccggctaccctttagtagatgct
ggtatgagagagttgtgggccactggttggctacatgatcgaattagggtggttgtctct
agcttctttgttaaggttttacagttgccatggagatggggtatgaagtacttttgggat
acccttttggatgctgatcttgaaagcgatgctcttggctggcagtacatatccggtact
ctacctgatagccgagaacttgacaggattgataatccacagtttgaaggctacaaattt
gatcctaacggagagtatgtaaggcggtggctcccagaactttcaagactaacaaccgaa
tggattcatcacccatgggacgcaccggaatctgtactgcaggcagcaggggtggaactc
ggatcaaactatcctctcccccttgttaaactagatgctgcgaaagatagactacagcaa
gcgctctctgacatgtgggagcaggaagctgcccatagggctgccattgagaatggtata
gaagaaggtctcggagattctgctgattccgaacccattgcatttcctcaggacttgcag
atggatgttgatcatgaccctccaaggaatgatacccaggctccaaataataataataat
aacaacaataataataataacaataatattcgtcgttttcaggatcagatggtgcctagc
attacatctacatatttcagggttgatgatgaagagacgtcttcagatcttcgacaacct
tcagtgggagatggaagagccgaggttccaagagatgtggttgtaaatcaagaagatcca
gtcataccagatccaaacccgggaatttcagttgcggctagaaggaataacatcacattt
gctgtacagaatgtagaagagtatggagctgagtcatcaagtactagtggtggtagtcga
ggtgaaaggagtagtggggttgttccggtttggtctcccgcaacttcttctttctccgat
caatttatgagtgatgacgccggtatggggcctggttccggcttcctgcagaggcatcca
cagtcccatcaactagttaattggaggcggctttctcaaactgggacaatgccggaaaaa
gaaaaaaaggaaacatttacagaaaaaaaggattag
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