Silene latifolia (white campion): 141596489
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Entry
141596489 CDS
T11116
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141596489
Membrane trafficking [BR:
slaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
141596489
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
SHLD1_C
DUF948
Motif
Other DBs
NCBI-GeneID:
141596489
NCBI-ProteinID:
XP_074272767
LinkDB
All DBs
Position
8:16134655..16139484
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AA seq
804 aa
AA seq
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MSSSPPQQSPSPMTLPATSTLSPAVVSYLNSTFSPKLDLNLSESTHRVSQLDSECSQLTH
KLADLTRHLEALLLSYASSSDQINGAFHHVRHRFDDLKSASSSFDSNSDGGGEQMVAEEL
PELAKEVARVEMARDYAETALKLDGLVGEIEDAVSSVMSRSLKKHIAESSKQESRSHAIS
SLNMAEDVLASVMKAHPHWTQLVTAADHRVNRALAILRPQAIADHRTLLSSLGWPPPLST
LGSSNMDTRRTSEVPNPISAMHGELKQNYSENFLALCSLQQLQRRRKARQLQGYNNIVAQ
YQPLWGIEELVNPLSLASQTHFQKWIDKPEYIFALVYKITRDYIDSVDELLQPLVDKAML
TGYSCREEWISGMVTSLSTYLAKEIFPKYCSSLNEETLPDVRLHTRLSWLHLVDLMISFD
KRIRALAAGIIDSEYGLLQRMSSLSVFCDRPDWLDIWAEIELGSLLDKLKPEMEDDRNWT
IKTHGTIIPGSDDYKSPIISFILLEQVELVIERCKSLPTVFMRFRFVRLVGAPIVHNFLS
CLINKCQEAEGLTALADDDALARVLTSINSARHIGSVLKVRSDDDFFLDMALENNDQFGE
PFENSRFAGAIEETENGVFEEDIRNLEEFRIEWIDNITNVVLRGLDAPIRDYVRNKKQWQ
EKVEEGWTVTQSFVVALDYLQGKISKLEEGLNNEDFITVWKGVAKGIDRLIFTSILISNA
KFHDGGVIRFGGDMDVLFGVFKSWCLRPEGFFPRVSEGLKLLKMDEDHLHDLFVQGEGWM
KHNKFRHLSLAEAEKIARCRVFKH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcgccgccgcagcagtcgccgtcgccgatgactttaccggcgacatccacc
ctctccccggcggttgtatcctacctcaactccacattctctcccaaactcgacctcaac
ctctctgagtcgactcaccgagtctctcaactcgactctgagtgctcgcaattgactcac
aaactcgccgatctaactcgccacctcgaagcattgcttctttcttacgcttcttcttct
gatcaaattaatggcgcttttcaccatgttcgacatcggtttgatgatcttaagtccgca
tcctctagtttcgactcaaattcagatggaggaggagaacaaatggtggcggaggagttg
ccggagcttgcgaaggaggttgctagggttgagatggctagggattatgctgagactgcg
ttgaagcttgatgggttagtcggtgaaatcgaagatgcggtctcttctgtgatgagcaga
agtttgaagaaacatatagcagaaagttcaaagcaggaatcacgcagccatgctataagt
tcactaaacatggcggaagatgttttagcttcggtaatgaaggctcaccctcattggacc
caacttgtaactgctgctgatcatagagtgaatcgagccttggccatcttgagaccacaa
gccattgctgatcaccgcacccttctttcttcccttggctggccacctcccctttcaaca
ttgggctcttcaaatatggatacacggagaacctctgaagtgccaaatcctatttcagca
atgcatggagagcttaagcagaattatagtgaaaattttcttgcattgtgcagcctgcag
caattgcagcgacgtaggaaggcacggcaacttcaggggtataacaatattgttgctcaa
taccagccactttggggtattgaagaacttgtgaatcctctatctcttgcatcccaaact
catttccagaagtggattgataaacccgaatacatttttgccctcgtttataaaattacc
agggattatatagactcagtagatgagttgttgcaaccattagtcgacaaagcaatgttg
acgggatacagttgcagggaggaatggatttcaggtatggtgacctccctgtcaacttac
ttggcaaaggagatattcccgaaatattgttctagtctaaatgaagaaaccttaccagat
gttaggcttcatacacggttgtcttggcttcatctagttgatttgatgatatcatttgat
aaaagaattcgtgctttggctgccggcatcatagattccgagtatggcctcttgcaaagg
atgtcttctctgtctgtcttctgtgatcggccagattggcttgatatatgggcagagata
gaacttggtagtcttcttgacaaattaaagccagagatggaggatgacaggaactggaca
attaagacacacggaaccataattccaggatcagatgattacaaatcgcctattatttca
ttcatactgctagaacaggtggaattggtcattgaacgttgtaagtcactgcctactgta
tttatgaggtttagatttgtcagattagtgggtgcaccaattgttcataactttttaagt
tgcctcattaacaaatgtcaagaagcagaagggctcactgctttggcagatgatgatgct
ttggcacgagttttgacatccattaattctgctcgccatattgggtcagtcttgaaagtt
aggtcagatgatgacttctttctcgatatggcacttgagaataatgatcagtttggtgaa
ccctttgaaaatagtcgtttcgctggtgcgattgaggaaactgaaaatggtgttttcgag
gaggacatcagaaacctagaggagttcagaatagagtggattgataatataacaaatgtt
gttttgaggggattagatgccccgattcgagattatgtaagaaataagaagcaatggcag
gagaaggttgaagaagggtggacagtgacacagtctttcgttgtggctctcgattacttg
caggggaagatatctaaactggaagaaggtctgaataacgaagattttatcacagtatgg
aaaggtgtagccaaaggcatcgaccgcttgatttttactagtattttaattagcaatgct
aagttccatgatggtggtgttataaggtttggaggtgatatggatgttctatttggtgta
tttaagagttggtgtttgagaccggaaggtttctttccccgtgtgagtgaaggccttaag
ttgctaaagatggacgaagatcatcttcatgatctctttgttcaaggggagggatggatg
aagcacaacaaattcaggcacttgagcctagctgaggccgaaaagattgctcgatgtaga
gtttttaagcactag
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