Silene latifolia (white campion): 141596935
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Entry
141596935 CDS
T11116
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141596935
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141596935
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141596935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
AF_0924
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
141596935
NCBI-ProteinID:
XP_074273319
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All DBs
Position
8:69552280..69558156
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AA seq
498 aa
AA seq
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MRSDMGNGIWSIILLFCSCLIMMVSSSFALVDLEGGDFQYTFDDVEANFAPPVKTGGICG
KLYIAEPLDACSPLTNIVDHGGNYSAPFALIIRGGCGFEDKVRKAQKAGFEAAIIYDNED
DGILIAMAGNSAGIRIHAIFVSKATGETLKTYAGLDYELWIIPNESSAWSIMVISFISLL
AMSAALAVYFFVKRLRVRRERPEARIREFHGMSDRLVKAMPSLIFTTVTEDYCTSSTCAI
CLEDYVVGDRLRVLPCRHKFHAQCVDFWLCTWRTFCPVCKRDAKSSNDEPPASESTPLLS
SNPSSIASSPSSSFRSRSSAIRINSPSPRTHATPLNHSIPSSPQIPRHSDPLHHQHFPSM
SVSRSSMDLRNLSSQRLLASQFFSPNSLSRSPLVPGPLRSFHHQNPPSMSVSRSSTDLRN
MSSQRSLASQLISPHSMGYPSASPFQTRYMSPYIPSPSVGSPASYLGSSVRHQNALHHSE
SATSFSPYASAQSLPGCD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagatctgatatgggtaatggaatttggagtataattttgttgttttgttcatgtttg
atcatgatggttagttcatcctttgctcttgttgacttggagggtggtgattttcaatac
acttttgatgatgttgaagctaactttgcaccaccagtgaaaactggcggtatatgcggg
aaactgtacatagctgagcctcttgatgcatgttctccattgacaaatatagttgatcat
ggtggtaattatagtgctccatttgcgttaataataagaggtggttgtggctttgaggac
aaagttagaaaagcacagaaggccgggtttgaagctgcaattatctatgacaatgaggat
gatggtatattaattgcgatggcaggaaattctgctggaataaggatccatgccatattt
gtttccaaagcaactggagaaaccctaaagacctatgctggccttgattacgaattgtgg
ataataccaaatgaaagttctgcatggtcgataatggtaatttcattcatatctctactg
gcgatgtctgcagcgctggccgtttatttctttgttaagcggttgcgcgtaagacgtgag
aggcctgaagcccgtattcgagaatttcatggaatgagtgatcgtttggttaaagctatg
ccaagtttaatattcacaacagtaacagaggactattgtacatcatcaacatgtgccata
tgccttgaggattacgttgttggggacaggcttagggttctgccgtgccgtcacaaattt
catgcacaatgtgtggacttttggctttgtacatggagaacattttgtcccgtctgcaag
cgtgatgcaaaatctagcaatgatgaacctccagcttctgaatccacaccattactatca
tccaacccatcatctattgcttcttctccatcgtcttcatttagatctcgttcctcagcc
attcgaataaactcaccaagtccacgaacccatgcaactccccttaatcactctatccca
agtagtccccaaatcccccgtcattcagacccattacatcatcaacatttcccctcaatg
agtgtgagtcgaagctctatggatcttaggaatttgtcttctcaaagattgctagcttct
caatttttctctcctaattctctttcaagaagtcctctagtccccggccctttacgttca
tttcatcatcaaaatcccccttcgatgagcgtgagtagaagctcaacagatcttaggaat
atgtcttctcaaagatcactagcttctcagcttatatctcctcattctatgggctacccg
tctgcatcacctttccaaactcgatacatgtcaccatatattccaagtcctagtgttggt
tcgccggcaagttatcttgggtcttctgtaagacaccaaaatgcattacaccatagtgaa
tcggcaacaagtttctctccatatgcttctgcacaatcacttcctgggtgtgattga
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