Silene latifolia (white campion): 141597004
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Entry
141597004 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141597004 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
141597004
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
141597004
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
141597004
NCBI-ProteinID:
XP_074273392
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Position
8:81241772..81250743
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AA seq
721 aa
AA seq
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MIMKGAQLCVVILVLAFMQNLNANSIVSSIQTTNRTSYQSSKDLHSSTTNVQLRYEDNYV
VLDNGIVQVTILKPEGSVTKITYNGIANLLEELNDESNRGYWDVVWQGTGVTRKKGNLDR
LDCTDFKVIVETDEQVEVSFTRTWNSSLSAKLPPINIDKRFIMLRNSSGFYTYAIYDRPT
DFPGFTLANTRLAFKLNKIWFNYMAMADERQRQMPLPDDRSSNRSQELAYPEAVLLTNPI
EPEFKGEVDDKYQYSGEAKDIRVHGWICNDPPTGLWQITPSNEFRSAGPTKQYLTSHVGP
TSLSVLLSTHYSGKELMANFEDGEPWKKVLGPLFVYANSRIDNDTSQLWEDAKEQASVEA
KQWPYSFATSDDFPSSDERGSANGFLLIHDSFLKKNSSASAAYIGLAAPGEVGSWQRESK
GYQFWTRTDDKGHFTIDNIHPGNYSLYAWVPGFIGDYKYNDTLNITAGFIRRLLLVGLVH
VTDNFGFYYLFMNIILNWGAGHACDLGELVYEPPRDGPILWEIGIPDRSAAEFFIPDPDP
NLVNKLYVSHYRFRQYGLWDRYTDLYPDEDLVYNVNTSNYETDWFFAQVQRKVNNSYEGT
TWQIKFQLDSTNPNGTYYLRIALASATSSDLQVRVNDRHEDPPLFSSGLIGFDNTIARHG
VHGLYWLFNVSIPATKFVEGNNTIFLTQATGSSPWKGILYDYIRLESPAVDANDSLDDFY
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaaaggagcgcaattgtgcgtcgtaatcttggttttggctttcatgcaaaat
ctgaatgctaattccatcgtctcctcaattcaaactacaaacaggacaagttatcagagc
tcaaaggatttgcactcgtcgactacaaatgtccaactgcggtatgaagacaattatgta
gttttggacaacggcatagtccaagtgacaatattgaaaccagaaggaagtgtcactaaa
attacatataatggcattgctaatttgctggaagagctcaatgatgaatccaatcgcggt
tactgggatgttgtctggcaaggaaccggagttaccaggaaaaagggcaatcttgatagg
cttgattgtacagattttaaggtcatagttgaaacagatgagcaagtagaggtttcgttt
acacgaacatggaactcgtctctctctgccaagcttcctcctatcaatattgacaaaagg
ttcattatgctccggaattcttctggcttctatacctacgccatttatgatcggcctaca
gattttcctggcttcactctcgctaacactcgccttgcttttaagcttaacaaaatatgg
ttcaactacatggccatggcagatgaaaggcaaagacaaatgcctctgcctgatgatcgg
tcgtccaataggagccaagaactagcctaccctgaagctgttttactcactaacccaatt
gagcccgaattcaaaggggaggttgatgacaaataccaatactcaggtgaagctaaagat
attcgagtgcacgggtggatatgcaatgatccacccactggcttgtggcaaatcactcct
agcaatgagttccggtctgctggaccaaccaaacagtacctcacatcacatgttggccca
acatctctctcggtactcctaagtactcattactccggaaaggaactaatggcgaatttt
gaggatggggagccatggaagaaggttctaggcccactttttgtatatgctaattctaga
atagataatgatacgagccagctatgggaggacgcaaaagaacaggccagcgttgaagct
aaacaatggccgtacagctttgcaacttcagacgatttcccatcatctgatgagcgtggc
agtgcaaacggtttcttactcattcatgatagtttcctaaagaaaaattcatcagccagt
gcagcatatataggacttgctgcaccaggagaagttggatcttggcaaagggaaagcaag
ggatatcaattctggacaagaacagatgacaaaggccatttcaccattgataacatacac
ccaggaaactatagtttgtatgcctgggtaccgggttttatcggagattataaatacaac
gacacccttaatataactgcaggttttattagacgccttcttctggttggacttgttcat
gtgactgataactttgggttttattatttatttatgaatattatcttaaattggggagca
gggcacgcttgtgatttgggtgagcttgtgtatgaacctccaagggatggacctatttta
tgggagatcggcatacctgaccgctctgctgctgagttcttcattcctgatcctgaccct
aatttggtcaataagctctatgtttctcattacaggtttcggcaatatggtttatgggac
agatacacagatttatatcctgatgaagatttagtttataatgtcaacactagcaactac
gagacggattggttctttgctcaagttcaaaggaaggtaaacaactcatatgaaggaact
acatggcagataaagtttcaacttgacagcactaatccgaatggtacatattacttgaga
atagcgcttgcatctgctactagttcagacttacaggttagagttaacgatagacacgaa
gatccaccattattttcaagtggactaatagggtttgacaacactatagctagacatggt
gtacatgggctatactggctattcaacgtcagcataccggccaccaagtttgtggaggga
aataacaccatctttttaactcaagctacgggttcgtccccctggaaaggaatactgtac
gattacattcgtcttgaaagtcccgctgttgacgccaacgactccctagatgatttttat
acataa
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