Silene latifolia (white campion): 141597131
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Entry
141597131 CDS
T11116
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03440
Homologous recombination
slaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141597131
03460 Fanconi anemia pathway
141597131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141597131
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141597131
Enzymes [BR:
slaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
141597131
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
141597131
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
141597131
Bloom's syndrome complex (BTR)
141597131
FA (Fanconi anemia) pathway
141597131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
141597131
NCBI-ProteinID:
XP_074273585
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All DBs
Position
8:100884892..100898356
Genome browser
AA seq
719 aa
AA seq
DB search
MKKSPLPLNNICGTKKNISGKEALVKILRWHFGYPEFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSMCYQVPALAKNGIVLVVCPLIALMENQVAALKEKGIAAEFLSSTQTSSVKEKIYE
DLGSGKPNLKLLYVTPELIATAGFGSKLSKIHGRGLLHLIAIDEAHCISSWGHDFRPSYR
KLSSLRDRLPDVPILALTATAAPKVQKDVIESLCLRNPLVLKSSFNRPNIYYEVRYKDLL
DDVYGDLCAVMKSLGNVCGIVYCLERSACDALSAHLSSLGISCAAYHAGLNNKLRSSVLD
DWISSKIQVVVATVAFGYGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPCRSLLYY
GVDDRKRMEFILRNPKSKKLESSADVSSKKPMDDFIQMVEYCEGSGCRRKKILDSFGEQA
PTSLCAKTCDACKQPAIVAHQLTHLTSFATRHKNIISQVVMNSSSNNGDRSEFSEFWNRN
DDDSRGSEEEISDSDDDTEALKSLSCSKSTSRSQLSEKFDILQRAEEKYYQNKGSQKQIG
KTDKILISDVLRESSKQRLSNALKETHQRLGSLNVDIDSSVSFLEDECYKKYGKSGKSFY
ISQMASTVRWLSTASLADVSKRLLPVAMNHENQPEPTSLPVNPTQDVKEQFPEPFRVDLP
STAQVLDISEQKIVLPPVPSFSDFVRSNKMENSKSSYSTTSKRNSADGVSQAENKRSRF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcgccattgcctttaaataatatttgtgggactaagaagaatatatctggg
aaggaagccctggtcaaaatcttgagatggcatttcggctatcctgaatttcggggcaag
cagcttgaggccattgaagctgttctatcaggtcgggattgtttctgtctcatgcccact
gggggtggaaagtcaatgtgctatcaagttcctgctttggcgaagaacgggattgttctt
gttgtctgtccattaatagcattaatggaaaaccaagtggcagcactgaaggagaagggt
attgcagctgaatttctatcctcaactcaaacatctagtgttaaagagaagatatatgag
gacctcggctctggaaaacctaatttgaagctactttacgtaactccagagttgatagca
actgcaggttttgggtcgaagctttcaaaaattcatggcaggggactgttgcatctgata
gctatagatgaggcacattgcatttcatcatggggccatgacttcaggcccagctatcgg
aaactatcctctctaagagaccgcctaccagatgttcctattttggctttgactgcaact
gctgcaccaaaggttcagaaggatgtgattgagtcattgtgcttacgaaatccattagtt
ctaaaatcatccttcaatcgcccaaatatttattatgaagtgcggtacaaagatctcttg
gatgatgtttatggtgatttatgtgcggtaatgaaatctcttggaaacgtctgtggaata
gtgtattgtctggaacgatcagcttgtgacgccttgtctgcccatttgtcaagtttgggc
atatcatgtgctgcttatcatgcaggcttgaataataaattaagaagttccgtgttagat
gattggatttcttcaaaaatacaagtagttgtcgcaacagtagcctttgggtatggaata
gatagaaaagatgttcgaattgtttgccactttaatataccgaagtcaatggaagcattc
tatcaggagtctggtagagccgggcgagatcaattgccatgtcgaagtcttctatattat
ggagttgatgatcgaaagagaatggaatttatattaaggaatcctaaaagcaagaaattg
gagtcctcagctgatgtatcctcaaagaagccaatggatgatttcatacagatggttgag
tactgtgaaggctctggctgtcgtaggaagaagatactggacagctttggcgaacaggca
cctacgtcgctctgcgccaaaacatgtgatgcctgcaaacagcctgcaatagttgcacat
cagttgacccacttgacttcttttgctactcgacataaaaatataatttctcaagttgtc
atgaacagttcctccaacaatggtgacagatcagagtttagtgaattttggaaccgaaat
gatgacgattctcgtggttccgaggaagaaatatccgattctgacgatgatactgaagca
ttgaagagcttgagctgctccaagtcgacatcaagatctcagttaagtgagaagtttgac
atcttgcagcgagcagaagaaaagtattatcagaataaagggtctcagaaacagattggt
aaaacagacaagattttgatatccgacgtgctaagagaatcaagtaagcaaagattgtca
aatgctttgaaggagactcaccaacggcttggtagcttaaatgtcgacattgattcatca
gtctcgtttcttgaagatgaatgttacaagaaatatgggaaaagtgggaagtccttttat
atttctcagatggctagtacagtgaggtggctgtcaacagcaagtttggccgatgtttcg
aaaaggctgctccctgtcgctatgaatcacgaaaaccagcctgaaccgacttcccttccc
gttaacccgactcaagatgtgaaagaacaattcccagaaccttttagagtcgatctacct
tcaactgcccaagtattagatatcagtgaacaaaaaatagtgctacctcctgttccatcc
ttctctgactttgtaaggagcaataaaatggaaaacagtaaaagtagttatagtactacc
tccaaaaggaattcggcagacggagtttcccaagctgaaaataagagaagcaggttttaa
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