Silene latifolia (white campion): 141597145
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Entry
141597145 CDS
T11116
Name
(RefSeq) long chain base biosynthesis protein 1-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00600
Sphingolipid metabolism
slaf01100
Metabolic pathways
slaf04382
Cornified envelope formation
Module
slaf_M00094
Ceramide biosynthesis
slaf_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
141597145
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141597145
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141597145
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
141597145
Amino acid related enzymes [BR:
slaf01007
]
Aminotransferase (transaminase)
Class II
141597145
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DUF4405
Aminotran_5
Bromo_TP_like
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
141597145
NCBI-ProteinID:
XP_074273598
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Position
8:complement(101733715..101740152)
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AA seq
519 aa
AA seq
DB search
MSNLLRIPCYWMSLGFKLLIKKLGFDKLSEQQIQLIQDILSYLFIIIMYIHLVLQVYIKA
TDQRYEKATHLFLVALVYLISHTDKNREPPPKKVVEILTKEETDELCDEWTPESLVPALM
EYTDRAPQVLQSSAGPHTVINGKSAVNFASANYLGLLGHEKLLDSCISTVEKYGVGSCGP
RGFYGNVDVHLDCEARIARFMGTSDSILYSYGLATMFSVLPFHCSRTNIIVVDEGVHWGI
QNGLLLTRKKTIVYFKHNDMTSLENVLIDNILKHKRAKKCFIVIEAVYQNSGQIAPLDEI
VRLKDKYKCRLMMDESNSFGVLGHSGRGLTEYYGIPIGKIDVLTATLGHAMASEGGFCTG
SFCDNSGFVQDHRLDSKGYVYSASLPPYLACAAMSALVVLEEHPNLIQQLNENITFLRAG
LSIMQGLEVVSSPDSPIVFLKLTQSTGATETDNQLLQDIADQVLKEHGVYVSVSKRSPID
TCPLPIGIRLCVSAGHSKSDLTKLCHSLKTVCRSSINKS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttgttgcgaatcccgtgttattggatgtcattgggatttaaattacttata
aaaaaactgggatttgataagctgtccgagcaacagattcaactcattcaagacattctg
tcttacctttttataattattatgtacattcatctagtgttgcaagtttatataaaggct
actgatcaacgttatgagaaagcaactcatctttttctggtcgctcttgtttatctcata
tctcatacggataaaaatcgtgagcctccgccaaagaaagtagttgaaattttgacaaag
gaggaaacagatgaactctgtgatgaatggactcctgagtcacttgttccagctctcatg
gagtacacggatcgtgcacctcaagtgttacaaagttctgcagggcctcacacagtgatc
aatggaaaatcagcagtgaattttgcttcagcaaactatttaggattactcggacatgaa
aagttactcgattcgtgtatatcaactgtggagaaatatggtgtagggtcttgtggccct
cgtggattttacgggaatgtggatgttcatctagattgtgaggctagaattgctaggttt
atgggaacttcagattcaatactttattcatacggacttgctaccatgttcagtgtcctt
ccatttcactgcagcagaaccaatataattgtcgtagacgaaggagttcactggggcatt
caaaatggacttctcttaacaaggaaaaaaactattgtgtatttcaagcacaatgacatg
acatccttggaaaatgttttgattgacaatatacttaaacataagcgagctaagaagtgt
ttcattgttattgaggcagtgtatcagaattcaggtcaaattgctccactggatgaaata
gttagactgaaggacaagtataagtgcaggttgatgatggatgagagcaattcatttggt
gttcttggtcactcaggaagaggtctcactgaatactatgggataccgattgggaagatt
gatgtgctcacagctacattgggacatgccatggcttctgaaggggggttttgcacagga
tcattttgtgataattcaggatttgtccaggaccatcgtttagatagcaaaggttatgtg
tattctgcttcactgccaccttacttagcatgtgccgcaatgtcggctctcgttgtgctt
gaagaacatcctaatctaatacaacagttaaatgagaacattaccttcttaagggctggt
ttgtcaattatgcaaggacttgaagtggtgagcagtccggattcacccatagttttcttg
aagctaactcagtccacaggtgctaccgagactgacaaccagttgctccaagatattgct
gatcaggtattgaaggagcatggagtttatgtgtcggtatccaagaggtcgccaattgac
acgtgtccgttgcccatcggaatcagattgtgtgtatctgctggccactctaaatcagac
ctcaccaaactctgccattcattgaagactgtgtgccgtagttctattaacaagtcttag
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