Silene latifolia (white campion): 141597350
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Entry
141597350 CDS
T11116
Name
(RefSeq) ABC transporter G family member 32 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141597350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141597350
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
141597350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
AAA_16
AAA_29
AAA
ABC_trans_N
AAA_25
AAA_33
Zeta_toxin
AAA_28
DO-GTPase1
RsgA_GTPase
DnaB_C
Med31
Motif
Other DBs
NCBI-GeneID:
141597350
NCBI-ProteinID:
XP_074273876
LinkDB
All DBs
Position
8:111416422..111428304
Genome browser
AA seq
1418 aa
AA seq
DB search
MWNSTAENAFARSESFRSDGDDEEALRWAALERLPTYKRVRRGIFRNMLGDFREVNVSQL
EAEERKLVLDRLLDSVENDPKLFFDRMRRRFLAVDLGFPKVEVRFQHLTVETYVQIGSRA
LPTIPNFILNMSEAFLRKLHMYPGKRKKLTILDDISGIIRPSRLTLLLGPPSSGKTTFLL
ALAGRLGPALQMSGRITYNGHDLREFVPQRTSSYVSQQDCHAAEMTVRETLDLAARCQGV
GSKYDMLLELARREKDSRFKPEEDLDIFMKALALNGQDTSFLVDYILKILGLDICADTPV
GDEMIKGISGGQKKRLTTGELLAGQSRVLFMDEISNGLDSSTTYQIIKYLKHSTHALDET
TVISLLQPAPETFELFDDIILLSEGQIVYQGARDKVLDFFASMGFACPERKNVADFLQEV
TSKKDQAQYWSDPFRAHRYVPVERFAEAFHSFSVGTDVCRELATRFNKRNNHPAALSTSS
YGVSKWELLKIGYSWQKLLMKRNSFIYIFKFIQLLLVASITMTVFFRTKMHHKTVDDGAL
YLGSLYFSMVIILFNGFTEVSMLVMKLPVLYKHRELHFYPCWVYTLPSWLLSIPTSLYES
GVWVVVTYFVIGYDPSIIRLLKQFLLFFLLHQMSLGLFRVMGSLGRNMIVANTFGSFAML
VVMGLGGYIISKESIPKWWVWGFWLSPLMYGQNAVSVNEFLGHSWDKPFGNSRLGEAVLR
SRNLFTESYWYWIGVGAMVGYIVVFNLLFTIFLTYLQPLGKRQAVISKAEYQEKEKTKIG
ESSVIQLREFFQHSGSLNGKGFVQKGMVLPFQPLSMTFSNINYYVDVPPEMKQQGVSEDK
LQLLIDVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGSIKISGYPKKQETFA
RVSGYCEQNDIHSPCLTVLESLLFSAWLRLSSDVDLGTQMAFVQEVMELVELSPLSGALV
GLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARSAAIVMRTVRNIVNTGRTI
VCTIHQPSIDIFESFDELLFMKRGGQVIYAGPLGRKSCKLVDYFEAVEGVQKIRPGYNPA
AWMLEVTSMAEESRLGVDFAEVYKTSQLFQHNIELVDRLSKPPTNSKELNFPTIYSRSYF
NQFLTCLWKQYLSYWRSPQYTAVRFFYTIIISLMLGSICWKFGSKRENQQDIVNAMGSLY
AAVLFLGVTNGTAVQPVVSIERSVSYRERAAGLYSALPFAFAQVVIEFPYVFVQTVIYST
VFYSMAAFEWTPTKFIWYMFFTFFTVLYFTFYGMMTTAITPNHQVGAIIAAPFYMLWNLF
SGFMIPYKRIPVWWRWYYWLNPVSWSLYGFLTSQYGDDNTLVKLSDGIHSLSISQLLNEG
FGYRHDFVPVAGAVVVGFCLFFAFIFAYAVKSFNFQKR
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattctacggcggaaaacgccttcgcgaggtcggaatcgttccgtagcgacggc
gatgacgaggaggcgttacggtgggcggcattggagagacttccgacgtataagagagta
cgtcgaggaatatttaggaatatgcttggagattttagagaagtcaatgttagtcaactt
gaagctgaggaacgtaagcttgttttggatcggttattggattctgttgagaatgatcct
aagttgttctttgatcgcatgcgacgccgttttcttgcggtggatctgggttttccgaag
gtagaagttcgctttcagcatttaacagttgagacatacgtacaaattggaagcagagca
ttaccaacaattcctaacttcattttgaacatgtctgaggctttcttgaggaaattgcat
atgtacccagggaaaaggaagaaactgaccatcttagacgatattagtggaatcatcaga
ccttctagattgaccttgttactaggacctcccagttccgggaagacaacttttcttcta
gctcttgctgggcgccttggacctgcattgcagatgtcagggagaatcacatataatggg
catgatctgcgcgagtttgttcctcagaggacatcatcatatgtaagccaacaagactgt
catgctgcagagatgactgttagggaaactcttgatttggctgctcgttgtcaaggtgtt
ggaagcaaatacgatatgctactggagcttgcaagaagagaaaaggattctcgatttaaa
ccagaagaagaccttgatatattcatgaaggcattggctctgaatggacaggacacgagc
tttcttgtagattacattctgaagattttaggtttagatatatgtgcggacactccagtt
ggcgatgagatgattaaaggaatctctggtggccaaaagaagaggctcacaacaggtgaa
ctattagctggacaatcacgagtgttatttatggacgaaatatcaaatggacttgacagt
tcaacgacgtaccagattataaagtatctaaagcactcaactcatgcacttgatgagacg
acggtgatctctttgttgcagcctgctcctgaaacttttgagctttttgacgacatcata
ctattgtctgaaggtcagattgtttatcaaggggcacgtgataaagttcttgatttcttt
gcgtccatggggtttgcttgtcctgaaagaaagaatgttgctgattttttgcaagaggtt
acatcaaagaaggaccaggcacagtattggtcggatccctttcgagctcatcgatatgtt
cctgtagaaagatttgcagaagcatttcactcttttagtgtgggcaccgatgtatgccgt
gaattagccactcgattcaataaaagaaataatcatcctgcagctttatcgacctcttca
tatggtgtctcgaaatgggaacttctcaaaattggatattcgtggcagaagctcctaatg
aaaaggaattcttttatctacattttcaagttcatacagctgctattagttgcttccata
acaatgacggtattcttccgtacaaagatgcaccataaaacagttgatgatggagccctc
tatcttggttctttgtacttctctatggttataatccttttcaatgggttcacagaagtc
tccatgttggtgatgaaactcccagttctctacaagcacagggaattacacttttaccct
tgctgggtttatacacttccatcttggctcttgagtattccaacttctctgtatgaatct
ggtgtttgggtggtagtcacgtattttgtcattggctacgatcctagcatcataagatta
ttgaagcagttcttgttattctttctcttgcatcagatgtctttggggctcttccgtgtg
atggggtccctgggtcgaaatatgatagttgccaacacatttggatcttttgcaatgttg
gttgtcatgggccttggtggatacattatttcaaaagaaagcatccctaaatggtgggtc
tggggcttctggctatctcctcttatgtatggtcaaaatgcagtatcagtgaacgagttt
cttgggcattcgtgggataagccatttgggaattcaagactaggtgaagcagtgctgaga
tcaaggaacttatttaccgaaagttactggtattggattggagtaggtgccatggttgga
tatatagtcgtgttcaatctacttttcaccatcttcctcacctaccttcagccccttggg
aagcgacaagctgtgatctctaaagcggaataccaggagaaagaaaaaacaaagataggg
gaaagttctgttatccagctgagggaattctttcagcattcgggctcattaaatggcaaa
gggttcgtacaaaagggtatggttttaccatttcaaccgctgtcaatgacgttcagcaac
atcaattattatgtggatgttcctccggagatgaaacaacaaggagtatcagaagacaaa
ttgcagttattaattgatgtaactggagcttttaggcctggtgtgcttactgcattggtt
ggtgtcagcggtgctggtaaaactacactcatggatgtcttagctggcagaaaaacgggc
gggatcatagaagggagtattaaaatatctggttatcctaaaaaacaagaaacatttgct
agagtttctggttactgtgaacagaatgatatccattctccttgcttgaccgttctagaa
tcacttctgttttctgcatggttgcgtttgtcatcagatgtcgacctaggaacccaaatg
gcctttgttcaggaagttatggaacttgtggagctctctcccttaagtggggcattggtt
ggtctacctggaatagatgggttatccacagagcagagaaagaggttgaccattgcagtc
gaattggttgctaatccgtcgattatttttatggatgagccaacaactggattggatgca
aggtctgcagcaattgtaatgagaactgtacgaaatatcgtaaacactggtcgaactatt
gtctgcacaattcatcagccaagcatcgacatttttgaatcttttgacgagcttttgttt
atgaaacgcggaggacaagtcatatatgctggtccacttggaagaaaatcttgcaagctt
gttgattattttgaggcagtagaaggggtgcaaaagatcagaccaggttataaccctgct
gcgtggatgctcgaagttacttctatggcagaagaatcacgtctgggtgtagattttgca
gaagtgtacaaaacatcacaactgtttcagcataacatagagttggttgatcgtctcagc
aaaccacctactaattcaaaagaattaaacttcccaacgatatactcccgatcgtacttc
aatcagttcttgacttgtctttggaaacaatatctatcttactggcgaagtcctcagtat
acggctgtccgtttcttctacactattataatctcattgatgctgggatcaatttgctgg
aaattcggttctaaaagagaaaaccaacaggatatcgtcaatgcaatggggtcattgtac
gcagcagttctttttctgggagttaccaatggtacagcagttcaaccagttgtttcaatc
gaaagatcagtttcctatagagaacgagctgcagggttgtattcagctcttccttttgca
ttcgcccaggtcgttatcgagttcccttatgtttttgtgcagacggtcatttactcgaca
gtcttttattccatggccgcatttgagtggacaccaacaaagttcatttggtacatgttt
tttacattcttcacagtactatacttcaccttctatggaatgatgacgactgccatcaca
cccaaccaccaagtgggtgccattatcgctgctccattctatatgttgtggaacctcttc
agtggtttcatgattccttacaaaagaattcctgtatggtggagatggtattactggctc
aacccggtatcctggagtttatatggcttcctgacttcacaatacggagacgataacacc
ctggtgaagttatcagatgggatccactcgctatcgatcagccaactgttgaatgagggt
ttcggatacagacatgattttgtgccagtcgcaggtgccgttgtagttggcttctgtttg
ttttttgctttcatttttgcttatgcagttaaatcgttcaacttccagaaaaggtga
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