Silene latifolia (white campion): 141597412
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Entry
141597412 CDS
T11116
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04016
MAPK signaling pathway - plant
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
141597412
04075 Plant hormone signal transduction
141597412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141597412
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141597412
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Motif
Pfam:
LRR_FBXL15
LRR_SKP2
LRR_6
F-box
LRR_4
LRR_EndoS
F-box-like
DUF8346
Motif
Other DBs
NCBI-GeneID:
141597412
NCBI-ProteinID:
XP_074273972
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Position
8:112817687..112821332
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AA seq
623 aa
AA seq
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MPPLFNYSGEDEVDSETRFHPTSMAHENVCNPGKRLRLNAPLVQWSSRSNQIRQSSINVL
PDECLFEIFRHLPSKERSISACVSKHWLNLLCGIRLSEMYHTTSEDYNVDGCLTRSLSWS
EATDTRLTAIAIGTSFRGGLGKLSIRGSNPVRGVTNFGLLAIARGCPSLRSLSIWNVMNV
GDEGLFEISKECHKLEKLDLCSCPSFTNKGLTAIAEGCPNLVAFSVESCPNIGNNSIKAI
GKGCLKLRSIIIKKCPLVDDQGLVSLLLPSSVLPKVLSKVKLQALNISDFSLGVIGQFGK
NITSLTLSNLCYVSEIGFSAMGNAGGLMSLVSLSIASCSGLTSSSLEAIGRGCLNLKHTS
LHKCDCLSDDGLLAFSKSAHILESMHLEHCHEITLLGVISTLSSCSPKFRSFSLVKCTGI
KDIDVEKNIRKTCTPLRCLSIKDCPNFGSLSLKVLTNMCSRLSQLSLVGLYGLTDNGIVT
LSESGLAWLVKLNLTKCIDLTDESILAIVRLHGGKIKVLNLNGCSKITDMSLFSIADSCR
YLKDLDVSKCGVTDLGIGALADSNLHLQILSISGCSKISDKSLPDLIRLGKSLIDLNLKH
CSSLSINTLDLLGESLRRCNIHY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctttttaattacagtggggaagatgaagtagatagtgaaactcggtttcat
cctacttcaatggctcatgagaatgtatgcaatcctggcaaacggctgcgccttaacgct
ccattggtacaatggagctctagatctaaccaaattagacaatcaagtatcaatgttctt
cctgatgaatgtctctttgagattttcagacacttgcctagtaaagagagaagcatatct
gcttgtgtctcaaaacattggcttaatctcttgtgtggcatccgcttgtcggaaatgtac
catactacatctgaagattataatgtagatggttgtcttacaaggtctttatcatggagt
gaagctactgatacaagacttactgctattgcaattggaacatcttttcgaggtggatta
gggaagctttctattcggggaagcaaccctgttcgcggtgtgactaattttggtcttttg
gctatagcccgtgggtgtccatcgcttagatctctttctatatggaatgtcatgaatgtt
ggtgatgaaggactctttgagatatccaaggaatgtcataagttagagaaactagatctt
tgctcatgtccatctttcaccaacaagggtttaactgctattgccgaaggttgcccgaat
ttggttgctttttcggtggaatcatgccctaacattggcaataacagtataaaagctatt
ggtaaaggctgtcttaaactgagatctattataattaaaaagtgtccgttagtcgatgat
caagggcttgtaagtttattgttaccctcttcagttttgccaaaagttttgtcgaaagta
aagcttcaggccttaaacatttctgatttttctcttggggtcattggtcaatttgggaaa
aatatcactagtctcactctgagcaatctttgctatgtgagcgagatagggttttcggcc
atgggaaatgctggaggattaatgtcgttagtgtccttgtctattgcttcctgttcggga
ctgacaagttcgagtcttgaagctattggcaggggttgcttaaatctcaaacacacctct
ctccataaatgcgactgcttgtcggatgatggattattggcattctcaaagtcggctcat
attcttgagagcatgcatttggagcattgccatgaaattactctactaggggtgatatct
actctatccagttgcagtccaaaattcaggtcattttctttggttaagtgcacggggatc
aaggacatcgatgttgaaaaaaacatccggaaaacttgcacgcctcttagatgcctttct
atcaaagactgccctaacttcggtagccttagcttgaaagttttgacaaatatgtgttct
agattgagtcaactcagcctggttggactatacggattgaccgacaatgggattgttact
ctttccgagagcggtctagcctggcttgttaagttgaacctcactaagtgcatagatttg
accgacgaatctattctagccattgttaggctacatggtggaaagatcaaagtactgaac
cttaatgggtgcagcaaaataactgatatgagcttatttagtattgcagacagttgtcga
tacctcaaggatctcgacgtctcaaagtgtggggtcacagacttaggcattggtgcttta
gctgactcaaacctacacctacagattctttccatatcaggctgttctaagatatcggac
aagagcttacccgatcttatccgcctaggaaagagtcttattgatttgaacctcaaacat
tgcagctcacttagcatcaacactcttgatttgctcggggaaagtcttaggcgatgcaat
attcactattga
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