Silene latifolia (white campion): 141598339
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Entry
141598339 CDS
T11116
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141598339
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141598339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
141598339
NCBI-ProteinID:
XP_074274226
LinkDB
All DBs
Position
1:complement(10744594..10755913)
Genome browser
AA seq
1108 aa
AA seq
DB search
MDETAQPLDASLRRSKRTRVTKSTFVDADTRSSESADDFAEDFEEVRPKPKRARAVDSPP
NHDLTLIEAIKGSRKNIPPLVKFWVERYEKDPKPAMLDLLAMLFESCGAKYHIEGDPFEE
LDVDNVVLALVNLARKGEVEDYQSSKKKDFNNLKDNIVYFWDNLVVECQNGPMFDGVLLE
KCTDYVIAISCTPPRIFRQVASLIGLQLVTSFITVAKMLGSQRETTQRQLNTENKKRAEG
PRAESLNKRLMTTHEKITMIEELMDKIFKGLFMHRYRDIDPIIRMSCIQSLGVWILSYPS
LFLQDRYLKYLGWTLSDKSAAVRKASIGGLQSLYEVDDNLPSLDLFTQRFSNRMIDLADD
IDVSVAVCAIGLVKHLLRHQLLKDDDLGPLYDLLVVEPPEIRRAIGELVYDHLIEQKSNS
SQSRSKDTSSSLVTISRLLQILREFSTDPILITYVIDDVWEYMNAMKDWKCIISTLLNEN
PSIELTETDATNLIRLLCASIKKAVGERIVPATDNRKQYYTKAQKEVMETSKREITVAMM
KNYGELLRKYVGDKTKAPPLVEISLYMNLELYSLKRQEQNFKTVLQLMKETFFKHGDKDT
LRTCVKAMNFCSVESKGELQEFANNKLKELEDELLSKLKIAMKEVADGDDEYPLLVNLKR
LYELQLSKSVPIDSLYDEFTSMLEGFRNVDEEVSSFLLLNMFLHINWALYSVVNSESVSE
GAISSLLSRRDILFKQLDYFLPPSQIQPEIKLGNQLACRVCTMLAELWCVFKKSRFTSTA
LEVLGFCPEQSMVVKFWTLCSQQLDISNETEDEDVNREYVEDTTRDAVMIAAGKLVTGDV
IPLEYLAPEIVSHFVMHGTNIAEVVKQLIVVLRKKDVDIFALSLEALKRAHYRHMAQQSK
IGDNSSVNKSFNDLKELAVHLSGTIVGAIRSKHRSDILKIVKDGIDYAFVDVPKKLSFLV
GAVLPFIGKLPLVDLPDLLKNIQGRTDNINTDEDPSGWRPYHIFVETLKDRCAKMEGFAG
ADEKEGSSVRRGRRPKQRNMRGKKLFDEQSSSEEEDAIGSSDQEAPDEEDEQEEDDVALI
NVIKSSSKLRSKKVSRPENSGNDRSGDE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaactgctcaacctttggatgcttcactacgtcgctcgaaaaggacgagagtt
accaagtcaacctttgtggacgccgatactcgatcgagtgaaagcgccgacgattttgct
gaagattttgaggaagttcgtcctaaacctaaacgcgcccgcgctgtcgattcacctccg
aatcatgaccttaccttgattgaggccattaaagggagcaggaagaatatccctccactt
gtcaaattttgggtagagcgctatgaaaaggatccaaagccagcaatgctagaccttctg
gccatgctatttgagtcatgcggtgcgaagtatcacattgaaggagatccttttgaggag
cttgatgttgacaatgtagtcctggctttggttaatctcgcacggaagggtgaagttgag
gattatcaaagctcaaaaaagaaggatttcaacaatctcaaagataacattgtttacttt
tgggataatttagtggttgaatgtcaaaatggcccaatgtttgatggggttttgcttgag
aagtgcacagactatgtaattgctatatcctgcactccaccacgaatctttcgccaggtc
gcttcattgattggccttcagcttgtcacatcattcatcaccgttgcaaaaatgcttgga
tctcagcgtgaaactacacagaggcagttaaatactgagaacaagaaaagagcagagggt
cctcgagcggagtctctcaacaagagactgatgacaactcatgaaaaaataacaatgatt
gaggagctgatggacaagatatttaagggactatttatgcatcgttatcgagacattgat
cccataatccggatgtcctgtatacaatcattgggtgtctggatcttgtcatacccttcg
ttgttcctccaggatcgataccttaagtatcttgggtggactttgagtgacaagagtgct
gctgtgagaaaagcttccatcggtgggttgcagagcctttacgaagtggatgataatttg
ccatcccttgatctttttacgcagagattctccaacaggatgattgatcttgctgatgac
attgatgtctcagtggctgtatgtgccattggacttgttaagcacttgctaaggcatcag
cttttaaaagatgacgacttaggccccttgtatgatctgcttgtcgttgaacctccagaa
atcagacgtgcaataggagagctggtctatgatcacttgattgaacagaaatcgaacagt
tcacagtctcgctcaaaagacacatcgtcatctctggttacgattagtagattgttacaa
atcctgagagaattttcaactgatcctattttgataacatatgtcattgatgacgtctgg
gagtacatgaatgccatgaaagactggaagtgcataatttctacactgttgaatgaaaat
ccatcaattgagcttactgaaactgatgcaacaaacttgatccgacttctttgtgcgtct
attaagaaggctgttggagaaaggatcgtacccgctactgataatcgaaaacaatactat
acaaaggctcaaaaggaagttatggaaacatccaagcgagaaattacggtggcaatgatg
aaaaactatggtgaactcttacgtaaatatgtgggagacaagacaaaagctccaccgttg
gttgaaatctccctatacatgaatcttgagctttattctcttaaaagacaagaacagaat
tttaagaccgtgcttcagctcatgaaggagacatttttcaagcatggtgacaaggacact
cttcggacatgtgtaaaagctatgaacttctgttcagttgagagtaaaggagaacttcaa
gaatttgccaacaacaaactcaaggaactcgaggatgaacttttatcaaaactcaagata
gctatgaaagaagtggcggatggtgatgatgaatatcctcttcttgtgaacctgaaaaga
ctgtacgagcttcagttgtcaaaatctgtgcctatagatagcttatatgacgagttcacc
tctatgcttgaaggttttaggaatgtggatgaggaagtgagcagtttcctgctgcttaac
atgtttctgcacatcaattgggctctgtactctgtagtgaactctgaatctgtatcagaa
ggggctatctcttctttgctctctagacgtgatattttgtttaagcagttggattacttt
ctgccgccttctcaaatccaaccagagataaagcttggaaatcagcttgcttgcagagtt
tgtacaatgctcgctgagctctggtgtgtattcaaaaaatcccggttcacatctacagcc
ctggaagtcctggggttttgtccagaacagtccatggttgtgaaattttggactctatgt
tcgcagcagcttgatatatcgaatgaaacggaagatgaagatgtcaaccgggagtatgta
gaagacacaactcgtgatgcagttatgattgcagctggaaagcttgttactggtgatgtt
attccgctggagtaccttgcacctgagattgtctctcattttgtgatgcacggaaccaat
atcgctgaggtggttaagcagcttattgttgttcttcggaaaaaagatgtagacattttc
gctctctctctcgaagcgctgaaaagggcacattatcgtcatatggcccaacaatctaaa
attggtgacaactcttctgtgaacaagtctttcaacgatttgaaggaacttgccgttcac
ctatcaggaacaattgttggtgctattagaagtaagcatagatcagatatccttaaaatt
gtgaaggatggcatagactatgcgtttgtagatgttcccaagaagctatcgttcttggta
ggtgctgtgctacctttcatcgggaaacttcctcttgttgatcttcctgacctcttgaaa
aacatccaaggacgtacagataatataaacacagatgaggaccctagtggctggcgtccc
tatcacatatttgttgagaccctgaaagatagatgtgcaaagatggaaggatttgcaggt
gctgatgagaaagaaggatcttctgtgagacgaggccgccgacccaaacaacgtaacatg
cggggaaagaagttgtttgatgagcaaagttcgagtgaggaagaggatgcaattgggtca
tctgaccaagaagcaccagatgaggaagatgaacaggaggaagatgatgttgcgttgatc
aatgtcattaaatcgtcatccaagttgaggtctaaaaaggtgtctaggccagaaaacagt
ggcaatgaccgatctggagatgagtaa
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