Silene latifolia (white campion): 141598475
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Entry
141598475 CDS
T11116
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141598475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slaf04040
]
141598475
Ion channels [BR:
slaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141598475
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Motif
Pfam:
Ion_trans
cNMP_binding
UBM
IQ
Motif
Other DBs
NCBI-GeneID:
141598475
NCBI-ProteinID:
XP_074274286
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Position
9:complement(207874468..207936938)
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AA seq
608 aa
AA seq
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MNKLLSNRRFPHFSRPLATATTLVDDQKFHSHLLWRYQILDPNSDIVTRWNYIFLLTCMI
ALFIDPLYFFLPSVGVDRACLFSDNDLLTNVTVLRTLADLFYVLHIAMKFRTAFVSRSSR
VFGRGELVMDPYEIAWRYLKSDFAIDLAAALPLPQVVNWIVIPKLKRKKSDQTNYTLSLI
VLFQYVPRFFLMFPLNKRIIKTTGVVAKTAWSGAAYNLLLYMLASHILGSIWYSAAIARQ
YSCWRTECEIEKKRFPACLLKYLDCTTVTDVDRQYWLNNTYVVFNCDPRNNRAEFKFGMF
AEAFTSGVGSSNFVRKYLYCLWFGLKNLSSYGQNLETTIFIGETLFAISVCIGGLFIFCL
LIGNMQTYLQSLTVRVEEWRIRRRDTEEWMRHRQLPPVLQERVRQFVQYDWLATRGVNEA
SILQSLPLDLRREVQRHLCLNLLRRVPFFSKMDNLLLDAICERLIATLSTKGTYIFREGD
PVDEMLFIIRGQLESSTTGGGRYGFYNSITLRPGDFCGEELLTWALIPNSNLNLPLSTRT
VKALTEVEAFALGAEDLQFFSTQFKRLHSKALQDAFRYYSHQWRTWGACYIQSAWRRYRK
RKMSNIMF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactcctctcaaatcgtcgatttccacacttctctcgccctctagccaccgct
acaacattggttgatgatcaaaagttccattctcatttgttatggagataccaaatttta
gatccaaattccgatattgtaactcgatggaattacattttccttctcacatgtatgatt
gctcttttcattgatcctctttacttttttcttccatcggttggtgtcgatcgtgcttgt
ctcttttctgacaatgatctcctaacaaatgttaccgttcttcgcaccctcgccgatctc
ttttatgttcttcatattgccatgaaatttcgcactgcttttgtttctcgtagctctaga
gtttttggtcgaggagaattagtaatggacccttatgaaattgcatggaggtatctcaaa
tctgattttgcaatagatttggctgctgccttacctcttcctcaggtggtaaactggatt
gtcattccaaaattaaagagaaaaaaatcagatcagacaaactatactttgtcacttatt
gtgcttttccagtacgtaccaagattttttctcatgtttccattgaacaagcgtataata
aaaactactggtgtggtggctaagactgcatggtccggggcagcatacaatcttcttttg
tacatgttagcaagccatattttgggatcaatttggtactctgcagctatagctcgccag
tactcgtgttggcgaaccgagtgcgaaattgaaaagaagcggttcccagcatgtttgctt
aaatatcttgattgtacaacagtcactgatgtggacagacaatattggttaaataacacc
tacgtggtttttaattgtgacccgagaaacaatcgtgcagaattcaaatttggaatgttt
gcagaagctttcacaagcggagttggttcttccaacttcgttagaaaatatctttattgt
ttatggtttggcctaaagaacctaagttcttatgggcaaaatttggaaacaacaattttt
attggagaaactttatttgctatttctgtatgtattggagggttattcatattttgcctc
ttgattggaaatatgcagacatatctacaatcactcaccgtgagagttgaagaatggcga
atcagacgaagagatacagaagagtggatgagacatcgacaactgcctccagttttgcaa
gaacgtgtacgacaatttgttcagtatgattggttagccacaagaggtgtcaatgaagct
tctattttacaatcattacccttagatcttcgacgtgaagtacaacgtcacctttgcctc
aaccttcttcgaagggtaccatttttctcaaaaatggataacttgttgctagatgctatt
tgtgaacgactaatagcgacattaagtacaaaaggtacgtacatatttagagaaggtgat
ccagtggatgaaatgcttttcattattagggggcaacttgaaagttctacaacaggcggt
ggacgatatggattttataattctatcaccttaagacctggtgacttttgcggagaagaa
ttattgacttgggcgttaattcctaactcaaatcttaatcttcctttatcaactcgaact
gttaaagcactaactgaagttgaagcttttgcacttggagctgaagatttacaattcttt
tcaactcaatttaaacgtcttcatagtaaagcattacaagatgcatttagatattactca
catcaatggagaacatggggtgcttgttacattcaatctgcatggagaagatatagaaaa
agaaagatgtcaaatataatgttttaa
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