Silene latifolia (white campion): 141598535
Help
Entry
141598535 CDS
T11116
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03030
DNA replication
slaf03420
Nucleotide excision repair
slaf03430
Mismatch repair
slaf03440
Homologous recombination
slaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141598535
03420 Nucleotide excision repair
141598535
03430 Mismatch repair
141598535
03440 Homologous recombination
141598535
03460 Fanconi anemia pathway
141598535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141598535
03032 DNA replication proteins [BR:
slaf03032
]
141598535
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141598535
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141598535
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141598535
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141598535
MMR (mismatch excision repair)
141598535
DSBR (double strand breaks repair)
HR (homologous recombination)
141598535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
DUF223
Motif
Other DBs
NCBI-GeneID:
141598535
NCBI-ProteinID:
XP_074274304
LinkDB
All DBs
Position
9:224718455..224721289
Genome browser
AA seq
380 aa
AA seq
DB search
MRPRRKRIKELSGSTGPYTIRAKVIEKTNVHSEPDGQGLELQIITFQDEEGTKMRTFLHE
HELEFFQGVIQDNLEYDISNAKLKLDVDATSENPDGQIYDIFFNIDTIVKPVSGEEAPKA
LNFVLIGSIPRKVALEDRYDVLGVVIYVDRCCQTTANIERTADACEVMIVDHSHEQILII
TAWADLPLQECLALQSIAPSFPVVAFTALMPSYQKGFSLCTTHSTFIMLDPPREEAELLR
TWAKQNKSLLAAKRQHVFEVRLPEIHCTITRIETLLKKSANNTLQEEHHWLHVTLHQFDP
KDVHLYHGCSNCGTGNDEEIGVAYLCNDCLQDNVVSTPRMAATFQVADETGEYTLSAYTE
NLEMLLEMKAAAFHSLTEQV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctcggcgaaagcgcatcaaggaactttcaggatcaactggcccctacactatt
agagctaaagtcattgaaaaaacaaatgtgcattctgaaccagatggccaaggcttggag
ctacaaataattacattccaagatgaagagggtactaaaatgaggactttcctacacgaa
catgagctagaattttttcaaggcgttattcaggacaacctggaatacgacatctctaat
gcaaaactaaagttagacgttgatgcaacttcagagaatcctgatggtcagatttatgac
atctttttcaacatagataccattgtcaaacctgtatctggtgaagaagctcctaaggca
cttaatttcgtattaattggatcaatacccagaaaagtagcacttgaagaccgctatgat
gtgctaggagttgttatatatgttgaccgatgctgccaaaccactgccaacatagagcgg
acagccgatgcttgtgaagtaatgattgtcgatcacagccatgaacagattctgataata
acggcttgggcagatctgcctttgcaagaatgtttggcattgcagtccatagcaccaagc
tttcctgtggtagcctttacagctctaatgccaagctaccaaaaaggattttccctttgt
accacgcattcaacattcatcatgttagatccgccgagagaagaggctgaattgctcagg
acttgggccaagcaaaacaaaagtctactagcagcaaaaagacaacatgtctttgaagtc
cgccttccagaaatccattgtaccataacaagaattgaaacactcctcaaaaagagtgca
aacaacactttacaggaagaacaccactggctacatgttacgctgcaccagtttgaccct
aaagatgtgcacttgtaccatggttgtagtaattgtggcactggcaacgatgaagagata
ggagtcgcatatctgtgtaatgattgtctgcaggacaatgtcgtttccactccaagaatg
gcagcaacatttcaagttgcagacgaaactggagagtatactctatctgcatacactgaa
aatttagaaatgcttttggaaatgaaagctgcagccttccactctctgactgaacaggta
taa
DBGET
integrated database retrieval system
