Silene latifolia (white campion): 141598670
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Entry
141598670 CDS
T11116
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141598670
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
141598670
REST complex
141598670
Heterochromatin formation proteins
Other heterochromatin formation proteins
141598670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
141598670
NCBI-ProteinID:
XP_074274488
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All DBs
Position
9:2318849..2329654
Genome browser
AA seq
1325 aa
AA seq
DB search
MVGSGGSAQGSMQRLTTNDALAYLKAVKEMFSDKKEKYDEFLEVMKDFKAQRIDTTGVIA
RVKDLFKGHRNLILGFNTFLPKGYEITLPPEDEQPLVKKPVEFEEAISFVNKIKLRFQGD
DCVYKSFLDILNMYRKENKTISEVYQEVALLFREHRDLLEEFAHFLPDTSATAPVQHTPS
LRNSLSRDRNSAMPTTRPMHIDRKEREFAVEGSDADNDKLKLERDQRRRLDKDRDRGHEF
AADHGAENNGPAGVSGSYNDKTGLKTLYSQEFAFCEKVNQRLHNHNDYQGFLKCLHIYSR
EIITKQELQSLVRDILGKYPDLMEAFDEFLIHCENNDGFLGNVMSKKSLWPESLWSNSSS
KYVKTEDRERDRDLGREDRDRDHDYMERDRTERSSPYVSKEVANLRISSNSNKDKYIGKP
IQELDLSNCERCTPSYRLLPKNYPIPVASQKTEIGAQVLNDHWVSVTSGSEDYSFKHMRK
NQYEESLFRCEDDRFELDMLLEAVNVTIKRVEEILEKINANNFKVEGPIQIEDHFTAINL
RCIERLYGDHGLDVMDVLKKNATLALPVILTRLKQKQEEWARCRADFNKVWAEIYSKNYH
KSLDHRSFYFKQQDAKSLCTKALLAEVKEISEQKCKEDDSLLAIAAGNRRPIISHMEFEY
PDTELHEDLYQLMKYSCGEVCATEQLDKVMKIWTTFLEPMLGVPSRAQEKDDSEHVPRIK
NEATKSDGLANGGTNESPVRGATTHKLTNTCRNGDECSPPKLSSYDNHAKEDGCPVASIR
TQNNGNMVGQTSTLGKPTYNEQLTTSNVSPSSGVEQFHGRYNDSTSDPQLRSGNPADNNG
CEVKSNGGNVPSLELVDSARAVPTLNRDITGASKQIRSCPDSNGHAKSEREEGELSPTGD
FEEDNFAAYRDASAELANKPNDSATHGGQNDAYADDEGEESAHRSSEESENVSENGDVSA
SESGDREDGSPEHEEVADHGHNKDESEDEAEGMADAQGEGDGSSLVPLSVRLLKTVKPLA
KHDPASSNERTRGSRVFYGNDSFYVLFRLHQTLYERIRSAKINSSTADRKWKSSSDSLSS
DLYSRFMNALYSLVDGTSDNNKFEDDCRAIVGTQSYLLFTLDKLIYKLVKQLQILAADDV
DNKLLQLYAYESSRKSERFLDIVYHENTRVILHDENIYRVECSSSPTRLSIQLMEKGQDK
PELTAVAIDPIFSAYLQNDFLSVVPDKKEKSGIFLRSRNKRKYSSGVELSSAYEAMEGLQ
VVNGLECKIACTTSKVSYVLDTEDFLYRRRKRRTLHVSNACHDQAKSSKGSSHRLERYHR
LLSGL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtagtggcggtagtgctcaaggcagtatgcagaggctaactactaatgatgcc
ttagcgtatctgaaggcagtgaaggaaatgttctccgacaaaaaggagaaatatgatgaa
tttttagaagttatgaaagattttaaagctcagagaattgacactactggtgtaatagcg
agggttaaagatttgttcaaagggcatcggaacctaatattaggcttcaatacatttttg
cccaagggatatgaaatcacccttcctcctgaggatgagcaacctctggtgaaaaagcca
gttgaatttgaagaagcgattagttttgtcaataagattaagttgcggtttcaaggcgat
gactgtgtgtacaagtcatttcttgatattttgaacatgtataggaaagaaaataagacc
atcagtgaggtttaccaagaggtagctttgctcttccgggaacaccgagatctcctcgaa
gagttcgctcattttctcccagatacttcagcaacagctccagttcaacatacaccatct
cttaggaattctttgtcgcgggacaggaactcggccatgccaacgacaagaccgatgcat
atcgataggaaggaacgcgagttcgctgttgaaggttctgacgctgataacgacaaatta
aaactcgaaagagatcagagacggaggctggataaagatagagacaggggtcatgaattt
gctgctgatcatggtgctgaaaataatggtcctgccggagtgtctggttcttataatgat
aagactggactaaaaactttgtacagccaagagtttgcattctgcgagaaagtcaaccag
cggttacataatcataatgattatcagggatttttgaaatgcctgcatatatatagcagg
gaaataataacaaaacaagaattgcaatctctggtacgtgatatacttggaaaatatcca
gatctaatggaggcatttgatgagtttttaatacattgtgaaaataatgatggcttcctt
ggcaatgtaatgagtaaaaaatctttatggccagaatccttgtggagcaacagttcttca
aaatatgtcaagactgaggatagggagagagatagagatcttggaagagaagatagagat
agagatcatgattacatggaaagggaccggactgaaagaagtagtccctacgtgagtaaa
gaggttgcaaatctcagaatatcttcaaactcaaataaggataagtatattgggaaacct
attcaagagctcgacctctctaactgtgaacggtgcacacctagttaccgactgcttcct
aagaattaccccattcctgtggcaagtcaaaagactgagattggagctcaagtactgaat
gaccactgggtttctgtaacctctggaagtgaagattactcttttaaacacatgcgaaaa
aaccagtacgaggagagtctctttcggtgtgaggatgacaggtttgaactagatatgttg
ttggaggccgtgaacgttacaattaaacgcgtggaagagatcttggaaaaaattaatgca
aacaattttaaagttgaaggcccaatccagatagaggatcattttactgcgataaatctg
aggtgcatagagcgattgtatggtgaccacggtcttgacgtcatggatgtattaaagaag
aatgcaactcttgcattgccagtgatattgactcgtttgaaacaaaaacaggaagagtgg
gccagatgccgagctgatttcaacaaggtgtgggccgaaatatactcaaaaaactatcac
aagtcacttgatcaccgcagcttttacttcaagcagcaggatgcaaagagcttatgcaca
aaagctttactggctgaggttaaagaaattagtgagcaaaagtgcaaagaggatgattca
cttcttgctattgctgcgggaaatagacgcccaatcatttctcacatggagtttgagtac
cctgatacggagttacatgaagatttataccagcttatgaaatattcatgtggagaggtc
tgcgcaacagaacaattggataaagtgatgaaaatatggaccacatttctagaacccatg
cttggtgtaccctctcgggctcaggagaaagacgactctgagcatgttcccagaatcaag
aacgaggctactaaaagtgatggccttgctaatggtggtactaatgaaagtcctgttcgt
ggtgctactactcacaaactaactaatacttgcagaaatggagatgaatgtagtcctcct
aaactatctagttatgacaatcatgctaaagaagatggatgtcctgtagccagtattagg
acacaaaacaatggtaacatggttggtcaaacatctacactcggcaaaccaacttataat
gaacagttgacaacttctaatgtgtctccttcctctggtgttgagcaatttcatggaaga
tacaatgatagcacatcagatccgcagttgagatctggaaatccagctgataacaacggc
tgtgaagtgaaatcaaatggtggaaacgtgccttcactggagcttgttgattctgcaaga
gctgttccaacattaaatcgggatattaccggagccagtaaacaaattagatcttgtcca
gattctaatggacatgccaaatctgaaagagaagaaggcgagctatctccgactggagat
tttgaggaggataattttgcagcttatagggatgcatctgcagagcttgcaaataaacca
aatgacagtgctacacatggtggccagaatgatgcatatgctgatgatgaaggtgaggag
agtgctcacaggtcatcagaggagagcgagaatgtttcagaaaatggggatgtttctgcc
agcgagtctggtgatagggaggatggctcccctgagcatgaagaagtggcggatcatggg
cacaacaaggatgaaagtgaggatgaggcggaaggaatggctgatgcacaaggagaagga
gatgggtcgtcgttggtgccactttcagtacgtctcttaaaaactgtaaagcctctagca
aagcatgaccctgcatcttcaaatgaaagaacaagaggatcccgtgttttctatggaaat
gactccttctatgtgctctttagacttcatcaaactttgtatgaaagaatccggtcggca
aagattaattcatcaacagctgacagaaaatggaaatcctcaagcgattctctttcgtct
gacctgtattcaaggttcatgaatgctctatatagcttggttgatggtacttctgacaac
aataaatttgaggatgattgtcgagctattgttggcactcaatcatatcttctcttcaca
ttagacaagcttatatataagcttgtgaagcagcttcaaatattagcagcggatgatgtg
gacaacaaacttcttcagctatatgcatacgagagctcaagaaaatctgagagattctta
gatattgtttatcatgaaaatacgcgtgttatcctccatgacgaaaacatatatcgtgtt
gaatgctcatcttcacccactcgcctgtctatccagttaatggagaagggtcaggataag
ccagaacttactgctgttgcaatagacccaattttttcggcttacctacaaaacgacttc
ctctcagttgtcccagataagaaagagaagtctgggatctttttacgaagcaggaataaa
cgcaaatattcaagtggagttgaactctctagcgcgtatgaggcgatggaaggactccaa
gttgtcaatggtctagagtgcaagatagcttgcactacgtccaaggtgtcttacgtatta
gacacagaagatttcttatatcggagaagaaaaaggagaactttgcatgtgagcaacgca
tgccatgaccaggcaaagtcatcgaagggatcttctcaccgattagagcgataccataga
ttgctctcaggcttatag
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