Silene latifolia (white campion): 141598796
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Entry
141598796 CDS
T11116
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141598796
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141598796
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
141598796
NCBI-ProteinID:
XP_074274676
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Position
1:11920277..11924859
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AA seq
444 aa
AA seq
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MAEIFSKCCTVFTFLFLVLLLGYYVDGRVNITDRIEEQSKNLYNSSMAVQRIKEVEVRNE
EAVAEQPEEIVAMVQKSISNSTARRNLGYFSCGTGNPIDDCWRCDPNWHKNRKRLADCAI
GFGRNAVGGRDGKFYVVTDPSDHDAVNPKPGTLRHAVIQKEPLWIVFKRDMVITLKQELI
MNSFKTIDGRGYNVHIANGACITIQYITNVIIHGLNIHDCKPTGNAMVRSSPTHYGWRTI
ADGDGISIFGASHIWIDHNSLANCADGLIDAIMASTAITISNNYFTHHNEVMLLGHSDSY
TPDKIMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNR
YLAPANTHAKEVTKRVDNNEGRWKHWNWRSSGDLLLNGAYFTASGSEAGASYARASSLAA
KPSNLVATLTSGAGVLNCRRGRQC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattttctcaaaatgttgtaccgtattcacattcttattcttggtgcttctt
ctcggctactacgttgatggcagagtaaacataactgacaggattgaagagcagtcgaag
aacttgtacaactcatccatggcagtacagaggattaaggaggttgaagtgagaaatgaa
gaagcggtggccgaacaaccggaggagattgttgccatggtccaaaagagcattagtaac
agcacagcaagaagaaacctcggctatttttcgtgtggaacaggaaacccaattgatgat
tgttggagatgtgatcctaactggcataagaaccgcaagcgccttgctgactgtgccatt
gggttcggtcgcaatgctgtgggtggccgggacggtaaattctatgtggttactgaccca
agtgaccatgatgcagtcaacccgaagcctgggaccctccgtcatgcagtcatccagaaa
gagccgctttggattgttttcaagagagacatggtgatcaccctgaagcaagagctcatt
atgaacagcttcaaaactatcgatggccgaggatataatgttcacattgctaatggggct
tgcattacaatccaatacattactaatgtcatcatccatggtctcaatatacatgactgc
aagccaacaggtaatgctatggtcagaagctcgccgactcattatggatggagaactatt
gctgatggtgacgggatttccatcttcggtgccagtcatatatggattgaccataattcg
ctggcgaactgtgctgatggtctcattgatgctattatggcctccacagccattactatt
tcgaacaattacttcactcaccacaatgaggttatgttactcggtcacagtgactcatac
acaccggataagataatgcaggttactattgcctacaaccacttcggtgaaggacttatt
cagagaatgccaaggtgtaggcatgggtacttccatgtcgtaaataatgactacactcac
tgggaaatgtacgcgattggaggcagcgcagaacccaccatcaacagtcaaggaaacaga
taccttgcccctgcaaatactcatgccaaagaggtgactaagagggttgacaacaatgag
ggtagatggaagcactggaactggagatcatcaggagatctgcttctaaatggggcatat
ttcacagcatcgggatcagaagccggtgctagctacgccagagcctcaagcttggcagcg
aagccatccaatctcgttgccaccctaacttctggtgctggtgttctcaattgtcgccgt
ggtcgtcagtgttag
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