Silene latifolia (white campion): 141599006
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Entry
141599006 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141599006 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141599006
Enzymes [BR:
slaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
141599006
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
141599006
Prokaryotic type
141599006
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
141599006
NCBI-ProteinID:
XP_074274964
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Position
9:8874502..8881192
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AA seq
595 aa
AA seq
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MAAAVKTMAFSHFPLRFRSLMRIPLITFTSIKPTKCALSQFPKIPFSTSATPYPLQYDMI
ISRPSRRRGSNPPRLAKPRPESPGSDSDDSVKPARELSFEDWVDKKLTEKDGAGEGTGAR
MEAGTGEGYFGKMNSGRGGSGVEGMDKAKRKYYNKREKRMYGEDSDDERRRIREKSEVVE
LEPEVVEFRTLHKREEELYFYDAFALPWEKDKHYKMVYQLEKKYFPDQCLDKAFLEPGKS
NVDRERKAGVDKGFLDSRKSNVGGSRKAGVVDKGNLGSEKSNVGGLRGRKAGVGKNMGGD
SGEEDKKLVFFEEMGDGKDSGVRKDGVEDLSEKKVEEFFKCLKKVPNKDSEVHGGDGPFL
ASRSTGLPRVWDSPAGTVVLVNKPKGWTSFTVCGKLRRLTNVKKVGHAGTLDPMATGLLI
VCVGKATKVVDRYQGMIKGYSGTFRLGEATSTWDADSPVIQREPWEHIKEDDIKKAAASF
MGEIWQVPPMFSAIKVGGEKMYDKARRGESIELAPRRISILQFDIERSLEDRQNLIFRVI
CSKGTYIRSLCADLGKALGSCAHLTALRRDSIGDYAADDAYEFQELEDLITKRYV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcagtaaaaacaatggcgttttcccacttccctcttcgttttcgttcatta
atgcgcatacctttaatcactttcacttcaatcaaacccacaaaatgtgcattgtcccag
tttcccaaaatacccttttcaacttctgccaccccttaccctcttcagtatgatatgata
atctctcgcccttcacggcggcgaggaagtaacccaccccgacttgcgaaaccccgtcct
gagtcacccggttctgattcggatgactcggttaaacccgcccgggaactgagttttgag
gactgggttgataagaaattgaccgagaaagatggggcaggggaagggactggggcgagg
atggaggcagggacgggggaggggtattttggtaaaatgaatagtggtaggggtgggagt
ggggtcgagggtatggataaggctaagaggaagtattataataagagggaaaagaggatg
tatggggaggattcggatgacgagaggaggaggataagggaaaagagtgaggtggttgag
ttggaaccggaagtggttgagtttaggacattgcataagagggaagaggagttgtatttt
tatgatgcttttgctttgccttgggagaaagataagcattataagatggtttatcaattg
gagaagaagtattttcctgatcaatgtttggataaggcgtttttggagcccgggaagtcg
aatgtggatagggagaggaaagcgggtgtggataagggatttttggactccaggaagtcg
aatgtgggtgggtcgaggaaagcgggtgtggtggataagggaaatttgggctctgagaag
tcgaatgtgggtgggttgcgggggaggaaggcgggtgtagggaagaatatgggtggggat
agtggtgaggaggataaaaagttggtgttttttgaggagatgggtgatgggaaggacagt
ggggtaagaaaggatggtgttgaggatttatctgagaagaaggtggaagagttcttcaaa
tgtttgaagaaagttccgaataaggattcggaggttcatggtggggatggaccgtttctt
gcttcgaggagtactggtctgcctcgtgtatgggatagtcctgctggaactgtggttttg
gtgaacaagcctaaaggttggacctctttcactgtttgtggcaagctgcgtcgcttaact
aatgtgaaaaaggtaggccatgctgggactcttgatcctatggcgactggtttgttaatt
gtttgtgttgggaaagccactaaagttgtagacagataccagggaatgattaaggggtac
agtggaacttttcgtttaggagaggcaacttccacttgggatgcagattcaccggtgatc
caacgtgaaccatgggagcatatcaaggaggacgacataaagaaggctgccgcatccttt
atgggagagatatggcaagttccccctatgttttctgcaatcaaagttggtggtgagaag
atgtatgataaagccaggcgaggagaaagcattgaacttgcacctagacgaatttcgata
ttacaatttgatatagagcgtagcctagaagacaggcaaaatttgatattccgggttatc
tgttcaaaagggacatacattcgatctctctgtgcagacttggggaaagctctaggaagc
tgcgcgcatttaactgcccttcgtagagattctataggggattacgctgctgatgatgcc
tatgaattccaagaacttgaggaccttatcacaaaaagatatgtctag
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