Silene latifolia (white campion): 141599044
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Entry
141599044 CDS
T11116
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141599044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141599044
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141599044
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
141599044
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
141599044
BRCA1-C complex
141599044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
TcpF
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
141599044
NCBI-ProteinID:
XP_074275024
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Position
9:complement(9611853..9621277)
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AA seq
524 aa
AA seq
DB search
MVWGFFPVDPLSGENKYYIYAKGAYKVGRKGCDVTVGNDKGVSRVHAEIIVDDMEPFDSL
SSSTSSKVRIRDCSKYGTVIDRDSYGKERVHECPGREMYLKDGDLVSFGTGTVTFRFCYV
PLKFYLCNFTSSQGTPSTQDRVSSIGAHVTHEWTTQCTHVIVDPFMPVTEGIIDAILSKK
PLVLSTWLEFVATNRIRNEIPSYSSYIPTLTLDGASVTVADYRTRENCLRGYTFLLDSKD
KYRFQDRMQALLEVSGANVISIEDFDSNSQDPQDADSNRLVLVNPSASTDNFRHRNALSK
VNEVELISSVISGYLDSSIIISPSILISSSCSTGETIVAESDAETETETATSEHPIITHV
EPGNACEQQKSGNMESLDVKPNRTPVKRKIENQEHSHFVEPNKAHVRAKVEDLDSVNVDI
LYSQNLIVRHVNPPSATSLDSQDGIINFKRFRKTNTQSGNSFSNLVPFAKYPYNDSDYDK
ELSEHMKEEKRRKQMEAMAEDLFNTEKGRRRGVAGSLRGLLGQH
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggttttttccctgttgatcctctttcaggggaaaataagtattacatatat
gcaaagggagcttacaaggttggcagaaaaggctgcgatgtgacagtcggcaatgataaa
ggagtctcgcgtgttcatgctgagataattgtagatgatatggaaccttttgactctttg
tcatctagtacctcctcaaaagttcggattagagactgctcgaagtatggaactgttatt
gatcgagattcttacggaaaagaaagagtgcatgagtgccctggcagggaaatgtacttg
aaagatggagacttggtttcctttggcactggtactgtgactttcagattctgttatgtt
ccactgaaattctacctttgcaatttcacaagctcgcaaggaacaccttcgacacaagat
agagtgtcatctataggtgctcatgttactcacgagtggactactcagtgcacccatgta
attgttgacccatttatgcctgtcaccgaggggataattgatgcgattttatccaagaag
cctttagtattaagcacttggttagagtttgtagcaacaaacaggatccgtaatgaaatt
ccaagctatagttcatacattccaacattaactttggatggtgcatctgtgacagtggct
gattacagaactcgtgaaaactgtctaaggggatacacttttctgttggattcaaaagat
aagtatagatttcaagataggatgcaagcattgctggaagtttctggtgctaatgttatt
tccattgaggacttcgattctaacagccaggacccacaagatgcagattctaaccgctta
gtgcttgtaaatccttctgcatctactgataacttccgtcacaggaacgctctatctaaa
gtaaatgaggttgaattgatttcttctgtaatatcagggtacctggattcatcaatcatc
atatctccctcaattcttatttcgtcctcatgctcgacgggcgagactatagtagcggag
tctgatgcagagacagaaacagaaacagccacatcagagcatccaattataactcatgta
gagcctggaaatgcatgtgaacaacaaaagagtggaaatatggaaagtctggacgtgaag
ccgaatagaacacccgtcaaaagaaaaattgaaaatcaggagcattcgcattttgtggag
ccgaataaagcacatgtgagagcaaaggttgaagatctggatagtgtgaacgtggatatt
ttgtacagccagaatttaattgtccggcatgttaatcctccaagcgcaactagtttagat
tcgcaggatggaattattaatttcaagcgtttcagaaagactaacacccaatctgggaac
agctttagcaatttggtcccatttgccaagtatccgtacaatgactctgattatgataag
gaacttagtgaacacatgaaagaagaaaaaagaaggaaacagatggaagctatggcagaa
gacttgtttaacactgaaaagggacggcgccgtggagttgctggttctctgcgtggactg
ttgggtcagcattga
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