Silene latifolia (white campion): 141599099
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Entry
141599099 CDS
T11116
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141599099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141599099
03036 Chromosome and associated proteins [BR:
slaf03036
]
141599099
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141599099
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141599099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
141599099
NCBI-ProteinID:
XP_074275100
LinkDB
All DBs
Position
9:11041884..11060213
Genome browser
AA seq
1482 aa
AA seq
DB search
MEVPFFGFDSVKWVEAAVPDTAISASAPPSVAPLADDCASCSVIGTPPTYLIWRICKRLP
HAIEILELNADKELPKVGLRVVFPEALSPFACICKNEQIGAGYGSVYLLYVLSVSGVAYL
LSLKDISTYASSFVFSSNDFRHISTNVSPDCSPITSATATAGCLIVGRDDGSVSCFRLGA
IDENAQGFMYELRDDAALSRLWGLMSRSRLAGSVKDLMISDISGREFVFVLHSDGNLRVW
DLQRRGKIFSQSLSDPGTTPSRLWVGLVNVNSCTIPLAILHKQSSEANMQGVRIYRLTFP
PGQTHSLSIVSSGENIPLCEGKLLDVKFSSKNLWVLKEDRLLEWNLNFPNINWEERRCYS
MQEAFIAEQLFQSSENDLDDLYQSTCSIFSSSKAQIIGFLSSIVLRRLLRSGVYNGGVLR
LTFQDYDRRWSDNEFKALTVDELKREILLLIEHQAVSGSPFSAFKCWKEFLSRYFDRWRK
SNVPFSLLTDPACGVVGLIRTNAVSLFRSLEDVELLMYECKDFEELGMDLSSDDLEHEIL
YEVLCCTRHLSRQLGPAISPILYESVVGVSMISPEDIVPRLLKTVESGYDASLAALDVSE
LGADFVWKKELSDHKRFRKFSIDTLISIHGLCKKGNGWAKVLGVIESYLNRLVLRKPTEK
LDSEVVFSANLSIMVQATSQVADTMFKSAFDVLLFLNYIIDISGQVHMLPDDKSKIQLEL
IPMIQEIIAEWLIIHFLATLPSESLSAEDFSAQLSSLTIDNSNSKRSWTEKLGSVDFTLA
FILLLDAQDSSKDWRGHSFSGLPNPGSCINLTRHLSSWIIWGRSEKMSSHIFGHTIELAQ
SLLKHRQYDAAENLLMVMDARLRNEKLCGSIQSSGGEWCVLQHLLGCCLLAQVQRGSHGP
SKEKKVREAMRYFFRASSGEGAAGALQKLLADAGLSHLNNSGSVSSDAWKLYYYQSVMQK
FEQFGISDAACQFALAALEHVGDAVLPDSDASKNLFPDESAISVKGRLWANVFKFSLDLD
QYYDAYCAIVSNPDDDSKYICLRRFIIVLYERGATKILCNSHLPFISLTDKAEQELVWKA
AFADISAKPHPYKLLYAFEMHQQNWRKAATYIYLYSVQLKNEMNMRASQNTSHTLQERLN
GISAAINCLHLVHPMYAWISSHLIGNDRPSASHPSKRAKTREEQSGTGDNETQKQESYIG
IEKLEDEFVMTSAEYMLCLANVKWMRTGNRNLQEDLVDHLIEANLYDMAFTVVLRFWKGS
LLKRELERVFSSLALRCCPNRVTSPLLGSPGLLLTYTQDETMTEPPFDFESQSRQQRISQ
WEVLEQNLEKYKGLHERLPAVIAETLLRSDPHIELPLWLVDMFKGRQRQQIGMSGQESAP
ATLFGLYVDYGRFPEAAELLVDYIEAYGSMRPADIIHRKRPFATWFPYTAIERLWCHLEE
SIRVGHMIEQCEKLKALLHGALRSHLILLKTDSEDAISSAIH
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgccctttttcgggttcgattccgtaaaatgggtcgaagccgctgttcctgat
accgccatctccgcttccgcaccgccttccgttgctcctcttgctgacgactgcgcttcc
tgctctgttattggcacccctcctacctatcttatttggcgtatttgtaagaggctccct
catgctattgaaatattggagcttaatgctgataaagaattgccgaaggttggattgcgc
gtcgtctttccggaggcattatctccttttgcctgtatttgcaaaaatgagcagataggt
gctggttacggcagtgtttatcttctgtatgttttgtctgtgtctggtgtggcgtacctt
ctaagcctcaaagacatctcaacgtatgcttcttcctttgttttctcatccaacgacttt
cggcacatcagcacaaatgtctctcctgactgttcacctataacttctgccactgcaacg
gctggctgtcttattgtggggagagatgatgggtcagtcagttgtttccgattgggtgcc
attgatgaaaatgctcaaggtttcatgtatgagctgcgagatgatgcagctttaagtcgc
ttatggggtctcatgtcgaggagcaggttagctgggagtgtaaaggatttaatgatatcc
gacatttctggtagagagtttgtgtttgtacttcattccgatggaaacctacgagtttgg
gatcttcaacgtcgtggcaagatttttagtcaatctttaagtgacccaggaactactcca
tctcgattgtgggttggtctagtcaatgtcaactcatgtaccattcccttggcaatcttg
cacaagcaaagctcggaagccaacatgcaaggagtccgtatctaccgactaactttcccg
ccagggcagacgcacagtttgtctattgtgtcttcaggggagaacatccccttgtgtgag
ggaaagctgcttgatgtaaagttttcatcaaagaacttatgggttctgaaggaagacaga
ctgctagagtggaacttgaattttccgaatattaactgggaagaaaggagatgttactcc
atgcaggaagccttcattgcggagcaattgtttcagagttctgagaatgacctagatgat
ttataccaatctacctgttcgattttttcgtcatcaaaggcacaaattattggatttctt
tcatctattgtgctgcgcaggcttttgcgttcaggagtttataatggcggtgtcttgcgt
ttgaccttccaagattatgataggcggtggtctgataacgagtttaaggctttgactgtt
gatgagttaaagagggaaatccttcttcttattgaacatcaggctgtcagtggaagtcca
ttttcagcttttaagtgctggaaagaatttttatctcgctactttgatcggtggcgcaag
agcaatgtgccgttcagcttgcttactgatccagcttgtggagttgttggattaattaga
acgaatgctgtctctctctttcgctcactcgaggacgttgagctgcttatgtatgagtgt
aaagattttgaggagttgggcatggatttatcaagtgatgacttagagcatgagattttg
tatgaagtgctttgctgtacaagacatttaagcagacaattggggccagcaatttcaccc
attctttatgaatcagttgttggcgtatcaatgatatctcctgaggatatagtacctcgg
ttgctgaagaccgtagagtctggatatgatgcatcactcgcagcactcgatgtttcagag
ctaggagctgattttgtctggaagaaggagctttcagatcacaaacgtttcaggaaattc
tctatagatactctaatttccatccatggtttatgcaagaaaggcaatggatgggccaaa
gttctcggggttatagagagttatttgaatcgtttagtacttcgaaaacccacagagaag
ttagattctgaagttgtattcagtgctaacctatccattatggttcaagccacatctcaa
gttgctgatacaatgtttaagtctgcttttgatgtgctactcttcctgaactacattata
gacatcagtggccaggttcatatgttacctgatgataagtctaaaatccagcttgaactc
attccaatgattcaagaaataattgccgagtggctgattattcattttctggctacccta
ccatcagaatctctctcagcagaagatttcagtgctcagttgtcgtctctgaccattgat
aacagtaacagtaaaagatcttggactgagaagctaggttctgttgacttcacattggct
ttcatattgctcttagatgctcaggattcctccaaagactggagaggtcactccttttct
ggccttccgaatccaggaagctgcattaatttaacaaggcatttaagcagttggattatt
tggggaagatctgagaaaatgtcgtcacatatttttggccacacaatcgaacttgctcag
agcttgctcaagcatcgacagtatgatgctgctgagaatttgctcatggttatggatgcg
cgtctgaggaacgagaagctatgtggaagcattcaaagcagcggtggtgaatggtgcgtg
cttcagcatttactaggatgttgtctgcttgctcaggttcaaagaggatcacatggacct
tcgaaggagaaaaaagttagagaagccatgcgatacttctttagggcttcgtctggtgag
ggggctgctggtgctttacagaaattacttgcagatgctggattatcacatctgaataat
tctggatctgtatccagtgacgcctggaagctctactattatcaatcggtgatgcagaag
tttgagcaatttggtattagtgatgctgcttgccaatttgctcttgctgctcttgagcat
gtaggtgatgctgttttgcctgacagtgatgcctccaagaaccttttccctgatgaatca
gcaatttccgttaaagggagactctgggcaaatgtttttaagttttctttggatcttgat
caatattatgatgcatactgtgcaatagtttcaaatcctgatgatgatagtaaatacatt
tgcttgaggcggttcataattgtcctttatgagcgtggtgccacaaagatactttgcaac
agccatcttcccttcattagtttaacggataaggctgagcaagagctagtttggaaggcg
gcatttgctgacatttcagcaaagcctcatccttacaaattactatatgcctttgagatg
catcaacaaaattggcggaaggctgcaacctacatatacttgtattcagttcagctgaaa
aatgaaatgaacatgagggcttcccagaacacatcacatactcttcaagaaaggctgaat
ggcatatctgctgccattaattgtctgcatcttgttcatcccatgtatgcctggatcagt
tctcatttgattggaaatgaccgaccaagtgcttctcatccatctaaaagggctaaaacg
agggaagaacaatcaggtacaggtgataatgagactcaaaagcaggaatcgtatattggc
atagagaaacttgaagatgagtttgtgatgacgtctgcagaatacatgctttgcttggcg
aatgttaaatggatgcgtacaggaaacagaaatttgcaggaagacttagtggaccacttg
attgaggcgaatttgtatgatatggcgtttacagttgttctcaggttttggaaaggttct
ctattgaagagggaactggaaagagttttctcgtccctggccctgagatgttgtcctaat
agagttacttctcctttgctcggatcacctggtcttttgttaacatatacgcaagatgag
acaatgactgaaccaccatttgatttcgaatctcaatcgcgacaacaaaggatcagtcag
tgggaagtccttgagcagaatcttgaaaaatacaaaggactccatgaaagattgcctgca
gtgattgcagaaacgctcctgcgctctgatcctcacattgaactgcctctttggctagta
gatatgtttaagggtcgtcaaagacaacaaatagggatgtccggccaagaatctgctcct
gccacgctttttggtttgtatgttgactatggacgttttccagaagcagctgagctgcta
gttgactacatagaggcctatggatcaatgagaccagcggatattattcaccgaaaaaga
ccttttgctacttggttcccatacacagccattgaacgcttgtggtgccatcttgaagag
tcaatacgtgtaggtcacatgattgagcaatgtgaaaagctaaaggcacttctgcacgga
gctttacgtagtcatctcattctgctaaaaacagactcggaggatgccatctcttctgcc
attcattga
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integrated database retrieval system
