Silene latifolia (white campion): 141599118
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Entry
141599118 CDS
T11116
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141599118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141599118
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141599118
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141599118
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141599118
Enzymes [BR:
slaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
141599118
Messenger RNA biogenesis [BR:
slaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
141599118
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP60 / Chaperonin
141599118
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
141599118
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141599118
Exosomal proteins of other body fluids (saliva and urine)
141599118
Exosomal proteins of breast cancer cells
141599118
Exosomal proteins of colorectal cancer cells
141599118
Exosomal proteins of bladder cancer cells
141599118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SAP
Motif
Other DBs
NCBI-GeneID:
141599118
NCBI-ProteinID:
XP_074275132
LinkDB
All DBs
Position
9:13373857..13384484
Genome browser
AA seq
606 aa
AA seq
DB search
MSCCFPMVLGSVNGALIRANPRFSDTINLSPSVSCFNLHTHNCYATLPISGYCKNMSIRN
RLIVRAGPKSITFDTKCREALRAGIDKLADAVSVTLGPKGRNVIISDSKSLKVINDGVTI
AKAIELPDAVENAGAMLIQEVASKVNNAAGDGTTTAIILAREMIKYGLLAINFGANPSGV
RRGMEKTANELIRILKKRSIPVKGRDNIKAIASISAGNDDYIGNLIADAIDQIGADGVIT
IETSSTSETHIVVEEGMKIDKGYMSPHFVTNPDKSTVEFENAKVLVTDQKISSVQEIVPL
LEKTTQLSVPLLIIAEDISKEVLETLIVNKAKGVVRAAVVKCPGLGDGKKSLLQDIALMT
GADFLSADLGLCIGFATSDQLGIARKVTISNNSTTIVSDPSTKAEIQARILQIKKDLAET
DSSSFSKKLAERIAKLSGGVAVIKVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGG
ATYIHLCEEIPSIISSWEDTDEKIGAEILRKALLAPAKTIAANAGVDGDVVVEKTRSSEW
RVGYNAMTDKYEDLVEAGVIDPCRVPRCALQYAVSIAGLVLSTQAILVDRFRKPKPSVPH
VPGISP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgctgtttccccatggttctgggttctgttaatggtgctctaattagggcaaac
ccacgttttagtgacacaattaatctatccccttctgtttcttgcttcaatcttcatacc
cataattgctatgcaactttgccaatttctggatattgtaaaaatatgtcaatcagaaac
cggttgattgtaagagctggtccgaagagtattacatttgatacaaagtgtagagaagct
ctgcgagctggtatagacaagctagctgatgctgtttcagttacattaggacctaaaggg
cgcaatgtgattatctctgattcaaagagtttgaaagtcataaatgatggtgtcacaatt
gcaaaggcaatagaacttcctgatgcggttgagaatgctggggcaatgcttattcaagag
gttgcatctaaggtgaataatgcagctggtgatggcacaacaacagcaattattttagct
cgggaaatgatcaaatatggtttattagctattaactttggtgccaatccaagtggtgta
aggcgaggaatggagaagacagcgaatgagcttatcagaattttgaagaagcgaagtatt
ccagttaaaggaagagataatataaaagctatcgcctccatttctgctggaaatgatgac
tatattggaaatctaattgctgatgccattgatcagattggggctgatggtgtgatcact
attgagacatcctccacttctgaaactcatatagttgtcgaggaaggaatgaagatcgac
aagggttatatgtcacctcattttgtgactaacccggacaagtctactgtagaatttgag
aatgctaaagttctagtcactgatcagaagatatcttctgtgcaagagattgttcctttg
ttagaaaagactactcaacttagtgtgcctttactaatcatcgcggaggacatctcaaag
gaagtattggaaacacttattgtgaacaaagccaaaggcgttgttagagcagctgttgtg
aaatgccctgggttaggagatggcaaaaagtctttgctgcaagatatcgctctcatgaca
ggtgctgactttctctcagcggatttgggtctttgcattggatttgccacttctgatcag
cttggtatagccagaaaagtaaccatatcaaataactccaccactattgtttcagaccct
tcaacaaaagccgaaatccaagcaaggattttgcagataaagaaggatttagctgaaact
gatagctctagtttctccaagaaacttgctgagagaattgctaagctctctggtggtgtg
gcagtaatcaaggttggagctcacactgagactgagcttgaggatcgtaaacttaggatc
gaggatgcaaaaagtgccacatttgctgccatggatgaaggaatagtccctggtggtggg
gcaacttatatccatctctgtgaagagattccttcgatcatatcttcatgggaagacacc
gatgaaaagattggggctgagatattgagaaaggcactgcttgcacctgcaaaaactata
gctgcaaatgcaggtgttgacggcgacgttgtagtagaaaaaacacgctcttctgaatgg
cgcgtcggttataatgcaatgactgacaaatatgaagatcttgttgaggccggtgtgatt
gatccttgtcgtgttcctagatgtgctctacagtatgcagtttctatagccggtctagtt
ttatcaactcaagccatattggtcgacagatttaggaaaccaaaaccatctgtacctcat
gttccgggaatatctccttga
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