Silene latifolia (white campion): 141599214
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Entry
141599214 CDS
T11116
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00900
Terpenoid backbone biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Module
slaf_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141599214
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slaf01006
]
141599214
Enzymes [BR:
slaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141599214
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141599214
2.5.1.29 geranylgeranyl diphosphate synthase
141599214
Prenyltransferases [BR:
slaf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141599214
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Protein_K
Motif
Other DBs
NCBI-GeneID:
141599214
NCBI-ProteinID:
XP_074275258
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All DBs
Position
9:15686493..15688564
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AA seq
376 aa
AA seq
DB search
MNSISCSNLNLSTWVQTQVSIPSSRSSVSPNFNKKLNNNQNHNNNGKISFISVSSIKPTS
KMSQMKATFQTPTQNPTQKTQFNFEKYMMDKASKINESLSEAIPVKHPEIIYEAMRYGLL
AGGKRIRPMLCIAACELVGGEETAAMAAACAVEMIHTMSLIHDDLPCIDNDDLRRGKPTT
HKVYGEDVAVFAGDSLLSFAFEYLVKSTPVGIPAEKVVSAVGELASAIGAEGLLAGQVVD
THSEGVEGIKIEELEFIHIHKTAKLLEAAVVLGAILGGGTDEEMERLRRFARGIGLLFQV
VDDILDVTKSSEELGKTAGKDLLAEKVTFPKLMGIEKSREYAERLNKEAKEQLVGFDVDK
AMPLIALADYIAYRQN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcatcagttgcagtaatctgaatttaagcacttgggtacaaactcaagtttca
attccaagttctagatcttcagtttcacccaatttcaacaaaaaattgaataataatcaa
aatcacaataataatggcaaaatttcatttatttctgtatcctccattaaacccacctca
aaaatgtctcaaatgaaagcaacctttcaaacaccaacccagaacccaactcaaaagacc
caattcaatttcgagaaatacatgatggataaagcaagcaaaatcaacgaatcgctttcg
gaggcgatacccgtaaaacacccagaaataatctatgaagctatgagatacggtttatta
gctgggggaaagaggattagaccgatgttgtgtattgcggcgtgtgagctagtcggcggt
gaggagacggcggcaatggcggcggcgtgtgcggtggagatgattcatactatgagtctt
attcatgatgatcttccttgtatagataatgatgatcttagaagagggaaacctactact
cataaagtttatggtgaggatgttgcggtttttgcaggtgattcgcttttgtcgttcgct
ttcgagtatcttgtgaagtcgactccggtgggaattccggctgagaaggttgtttccgcg
gttggggagcttgcctctgctattggcgccgaagggctccttgctggacaggtggtagac
actcattcagaaggcgtagaagggataaagatcgaggagttggagtttattcacatccat
aagacagcgaaattgctggaggcggcggtggttttgggggcgattctagggggtggcact
gatgaggagatggaaaggttgcgacgttttgcaagaggaattggattgttgtttcaagtt
gtggatgatattctagatgtgacaaaatcgtctgaagaattggggaaaaccgcgggaaaa
gatttgttggcggaaaaagtaacgtttccgaaactaatggggatcgagaaatctagggag
tatgccgagagattgaataaagaggctaaagaacaacttgttggatttgatgttgataag
gcgatgcccttaattgctcttgctgattatattgcttatagacagaactaa
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