Silene latifolia (white campion): 141599215
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Entry
141599215 CDS
T11116
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00900
Terpenoid backbone biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Module
slaf_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141599215
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slaf01006
]
141599215
Enzymes [BR:
slaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141599215
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141599215
2.5.1.29 geranylgeranyl diphosphate synthase
141599215
Prenyltransferases [BR:
slaf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141599215
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
141599215
NCBI-ProteinID:
XP_074275260
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All DBs
Position
9:15689829..15692806
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AA seq
382 aa
AA seq
DB search
MSSSSCSNLNLSTWVQTHFSIPRSRSSISPNFNKNLINNHNYSNNNGKISFIPLSSIKKP
SKMSQIKSILTHQENQTPTQIPTQKTQFNFKKYMIDKASNVNEALSEAIPVKHPEIIHEA
MRYGLLAGGKRVRPVLCLAACELVGGEETAAMAAACAVEMIHTMSLIHDDLPCMDNDDLR
RGKPTTHKVYGEDVAVLAGDSLLSFAFEHLVKSTPAGIPAGKVVSAVGELASAIGAEGLV
AGQVVDIHSEGVEGVGIEELEFIHIHKTAKLLEAAVVLGAIIGGGTDEEVERLRRFARGI
GLLFQVVDDILDVTKSSEELGKTAGKDLLTEKATFPKLMGIEKSREYAERLIKEAKEQLV
GFDVDKAMPLVALTDYIGYRQN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcagcagttgcagtaatctgaatttaagcacttgggtacaaacccatttttca
attccaagatctagatcttcaatttcacccaatttcaacaaaaatttgattaataatcac
aattacagtaataataatggcaaaatctcatttattcctctttcctccattaaaaaacct
tcaaaaatgtcccaaatcaaatcaattttaacccatcaagaaaatcaaacaccaacccag
attccaactcaaaaaacccaattcaatttcaagaagtatatgattgacaaggcaagtaac
gtcaacgaagcgctttcggaagcgataccggtaaaacacccagaaataatccatgaagcg
atgagatacggtttattagctgggggaaagagggttagaccggttttatgtctggcggcg
tgtgagcttgttggtggtgaggagacggcggcgatggcggcggcgtgtgcggtggagatg
attcatactatgagtcttattcatgatgatcttccttgtatggataatgatgatcttagg
agagggaaacctactactcataaggtttatggtgaagatgttgcggttttagcgggcgat
tcgctgttgtcgttcgctttcgagcatcttgtgaagtctactccggcgggtattccggct
ggaaaggttgtttccgcggttggggagcttgcctctgctattggcgctgaggggctcgtt
gctggtcaggtggtggacattcattcagaaggtgttgaaggggtagggattgaggagttg
gagtttattcacatccataagactgcgaaactgctagaggcagcggtggttttgggagcg
ataataggtggtggcactgatgaagaggtggaaaggttgcgacgttttgctagaggaatt
gggttgttgtttcaggttgtggatgatattttagacgtgacaaaatcatctgaagaattg
gggaaaaccgcgggaaaagatttgttgactgagaaagcgacatttccgaaactaatgggg
attgagaaatcaagagagtatgctgagagattgattaaagaggctaaagaacaactagtt
ggattcgatgttgataaggcgatgcccttagttgcgcttaccgattacattggttatcga
cagaattaa
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