Silene latifolia (white campion): 141599235
Help
Entry
141599235 CDS
T11116
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141599235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141599235
03036 Chromosome and associated proteins [BR:
slaf03036
]
141599235
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141599235
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141599235
PBAF complex
141599235
GBAF(ncBAF) complex
141599235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SIMPL
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
141599235
NCBI-ProteinID:
XP_074275297
LinkDB
All DBs
Position
9:complement(16827842..16830826)
Genome browser
AA seq
526 aa
AA seq
DB search
MSANNNNQISSQFGNSGMMNPNLPPNFSTSSQGQNPQLGFALQGQYQLAQAQAFAQAQSK
AQAAAAAAHAQLLQAQGSLGISGGLGGSSSPSILGVGNSGVKRTPQKPPVRPPGPLGGNM
MSPMKNVMELTPGAKRKKQKPQEKNLSERVARILPESDLYTQLLEFESRVDAALTRKKVD
IQEALRNPPCVQKTLRIYVFNTFASQTQSIPKGNADPPTWTLKIIGRILEDGLDPEQAAL
MRANPLYPKFSTFFKRVTIALDQRLYPENHMIVWENSRSAAPVEGFEVKRKGDKELGVNI
QFDMNYMPEKFKLSPALTDLLGIEAETRPRIIAAIWHYVKARKLQNPNDPTFFNCDAQLQ
KVFGEDKMKFTMVSQKISNHLSRPPPIEVQHQIKLSGNAPVGNACYDVLVDIPLPIQREL
SMLLASTEKAKEIEACDEAICGAIRKIHEHRKRRAFFLGFSQSPVEFVNALLDSQGRDLK
HVSGEANRSADKERRSDFFNQPWVEDAVIRYLTRKPTNGHDGPGST
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaataacaacaatcaaatttcatcccaatttggcaatagtggcatgatgaac
cctaatttaccccccaattttagcacatcatctcaaggacaaaatccccagctagggttt
gcacttcagggtcaataccagctggcccaagctcaggcatttgcccaagcgcagtcgaaa
gcgcaggcggctgctgctgctgcacatgcccagctcctgcaggcacaggggtcattgggt
attagtggtgggttggggggttcttcttcgccctcgattttgggggttggtaattccggt
gtcaagaggaccccacagaagcctcctgttcgacctcccggtccattggggggtaatatg
atgtctcctatgaaaaatgtgatggagctcaccccgggtgcgaagaggaagaagcaaaag
cctcaggagaagaatttgagtgagagagtcgcgaggatattgcctgagtcggatttgtat
actcagttacttgagtttgagtcacgggttgatgctgcattgactaggaagaaagttgat
attcaggaggcattaaggaaccctccttgtgttcaaaagacactacgtatttatgtgttt
aatacttttgcgagtcaaacccaaagtattcccaagggaaatgccgatcctcctacttgg
actttgaagattataggaaggattttggaggatgggttagaccctgagcaggccgctttg
atgagagccaatccattgtatcccaagttctcgacttttttcaagagagttacgatagct
ttagatcagagattgtatcctgagaatcatatgatagtgtgggagaattctcgatcagct
gcacctgttgaaggttttgaggtgaaaaggaaaggggataaagaacttggggtcaatatt
caatttgatatgaactatatgcccgagaaattcaaactttcaccagctttgactgatctt
cttggtatagaagctgaaacccggccaagaattatagctgctatatggcactatgtcaag
gccaggaagttgcagaacccgaatgacccaactttcttcaattgtgatgctcagcttcag
aaggtgtttggtgaggataagatgaaatttactatggtctcacagaagatatcaaaccat
ctctctcgccccccgcccatagaggtgcagcatcaaattaaactttccgggaatgcccct
gtcggaaatgcttgttatgatgttctggtggatatacctttgccaatacagagagaactg
tctatgctgttggcaagtactgagaaagctaaggaaattgaggcctgtgatgaagcaata
tgtggtgctataaggaagatccatgaacaccgaaaaaggagagcattcttcctgggattt
agtcagtcgcctgtcgaatttgtcaatgcattgctagattctcagggtagagatttgaag
catgtgtctggggaagctaatcgtagtgcagataaagaacgacgatcagatttcttcaac
cagccatgggttgaggacgctgttattcgttatttgacccggaagcctaccaacggacat
gatggtcctgggagcacataa
DBGET
integrated database retrieval system
