Silene latifolia (white campion): 141599453
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Entry
141599453 CDS
T11116
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141599453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141599453
Membrane trafficking [BR:
slaf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
141599453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
141599453
NCBI-ProteinID:
XP_074275556
LinkDB
All DBs
Position
9:complement(27678594..27690892)
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AA seq
1727 aa
AA seq
DB search
MSAPAPPPLGGTTVVGRVLGPYLDTIIKNVAWRKHTHLVASCKSTLDKLATLPTSLDYLS
LSAASTADNSAVSAAEMIVSPLLLALDTAAPKIVDAALSAVFRLLSLNLLHFSLSSDGGK
SVISQLFDSVCKSAGVGDEAIEFCVLKTLLAAVRSPRVRFDGEYLNYVVKVCYNVYLGGK
SGTNQICAKAVLAQIVLIVFSRVELDTVRVNRFKIVSVSELLEFTDRNLSEGNSVQLVQS
SINEVMQSNEGFNEEIEQSSDNLEGDSENVDGTDELTAKMEEKSEEEEEVEEKESRLRED
GFILFKNLCKLSMKFSSQDQPDDQVLLRGRILSLELLKVVMDNGGPVWCSNERFMNIIKQ
FLCLSLLKNSALSVMTIFQLLCSIFVSLLLKFRSGLKAEIGIFFPMLILRVLENILQPSF
IQKMTVFNVLEKITQDPQLIVDIFVNYDCDLDAPNIYERTVNGLLKTALGPPSGSTTNLS
PVQDLTFRVESVKCLVRIIKSMGSWMDQQLNIGDASLAKKSQTIYGSVDIHANLNVEEGM
MAENDMHSESNSELLDAITLEQRQAYKLEIQKCISLFNRKPSKGIDFIIKTKKVIGSPEA
VASFLKNTVGLNPTAVGDYLGERDDFALKVMHAYVDGFNFEKKDFGEAIRYFLQGFKLPG
EAQKIDRIMEKFAERYCKCNPHSFKSADTAYILAYSVILLNTDAHNSMVKDKMTKADFIR
NSSGIDDGKDLPEEYLSALYDQIVKSEITMNGENSQPQSKQVNGLNRLFGLDSILNLVMG
KQAEEKPYGANGPLKNNIQEHFKSISGKSESVLYAVSDVSILRFMTEVCWGPMLAAFSMT
LDRSDDKLATSECLQGFRYSVHVTAVLGMETQRDAFVTSLAKFTYLHCAVDMKQKNINAI
KTIMTIAIEDGNFLQDAWEHILTCLSRFEHLQLLGEGAPADASFLSISSGEAELKSLKSS
DLASLKKKGALHNPAVAAVVRGGSYDSNAHGVNSPKLVTPDQVNNFILNLHLLDQIGSFE
LNHIFAHSQRLNSEAIVSFVRALCKVSMSELQSPTDPRVFSLTKIVEIAHYNMNRIRLVW
SRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFPIVM
QKSNSTEIRELVVRCISQMVLSRVSNVKSGWKSVFMVFTTAAGDDRKSVVLLAFETMEKI
VREYFLYITETESTVFTDCVRCLITFTNSKLNSDVSFNAIAFLRFCAVKLAEGGLFSNDD
SQYAISYDMHSSEEFFNGHALANKDENFSFWMPLLIGLSKLTSDPRSEIRKSALEVLFNI
LKDHGSLFSRPFWNVIFKFVVFPIFNSHDDKDDSGMDVDQSVQSSRDSSFQGSAWDSETT
PVAVDGLVDLFVTCFSVVRSQLPSAVAIFMDFIKNSGHAPAKTGISALVRLTNELGTTLS
EDDWKGIFMALKDAASSTIPGFLKLLRTMDNLEIPDGAKSYNGFETSSEHEQSSNDLDDD
SLQVAALVIPRTKSHISVLLVIIQVVSDLFKAHHNDLSTANIKILVEILSMISSHANQLN
SETGLILKLQQACNILELSEPPVVHFENESFQNYLNFLDDLLLERGSNSEDIDLEDQIFG
VCENILKTYLECAGTLSGKQNPPDQQMAQWVLPLPSSKRDELAARTPLLLSGLRTLINFQ
KESIKKYISRLLPLLIDLIGSEYSSGEVSLVLSDMFQTCLAPVLVES
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccagctcctccacctctgggcggcaccaccgtcgtcggccgcgtcctcggc
ccatacctcgacaccatcataaaaaacgtagcatggcgtaaacacactcacctcgtcgcc
tcctgtaaatccaccttagacaagctcgcaactcttcctacctccctcgactacctttct
ctctccgccgcgtcaaccgccgacaattcggcagtttccgcggcggagatgattgtctct
cctctcctcctcgccctcgacactgccgcgcccaagatcgtcgacgccgcactctccgcc
gtgttccgactcctctcgcttaatctcctccacttttctctatcttccgacgggggtaaa
tccgtcatttcgcagttgtttgactctgtgtgtaagtctgctggcgtaggtgatgaagcg
atcgagttttgcgtattgaagacgcttctcgccgcggttcgatcgcctagggttaggttt
gatggtgagtatttgaattatgttgtgaaagtttgttataatgtttatttaggtggtaaa
agtgggactaatcagatctgtgctaaggctgttttagctcagattgtgttgattgtgttt
tctagggttgagctggatactgtgagggttaataggtttaagattgtgtcggtttcggag
ttgttggagtttactgaccggaatttgagtgaagggaattctgttcagcttgttcagagt
tcgattaatgaggttatgcagtctaatgagggatttaatgaagagattgaacaaagttcc
gataatttagagggtgatagtgagaatgtggatgggactgatgaattgacggcgaaaatg
gaggagaagagtgaagaagaggaagaagtggaggagaaagagagtaggttaagagaggat
ggatttatattgtttaagaacttgtgtaagttgtctatgaagttctcgtcgcaagaccag
cctgatgatcaagttcttttgagagggagaattttgtccttggagttgcttaaggtggtc
atggataacggtggccccgtttggtgttcgaatgaaaggtttatgaatatcatcaaacag
tttctctgtttgtcattattaaagaacagtgcattgtcagtgatgactattttccagctt
ctgtgttccatttttgtgagcttgttgctgaagttcagatcaggattgaaagctgagata
ggaatttttttcccaatgctcatattacgtgtcttggagaatattcttcagcctagtttt
atccaaaaaatgactgtcttcaacgtacttgagaagataacccaagatccgcaactaatt
gttgatatttttgtcaattacgattgtgatcttgatgctccaaacatttatgagaggact
gttaatggccttttgaagactgctcttggtccaccatctggttccactacaaatttatct
ccagtacaggatctcacttttcgcgttgaatcagtgaagtgtcttgttagaattatcaag
tcaatgggatcttggatggatcaacaactgaatattggagatgcctctttagccaaaaaa
tctcaaactatctatggttcagtagacatacatgctaatctaaatgtagaggagggaatg
atggctgaaaatgacatgcattctgaatcaaattccgagttattggatgctattacactt
gagcaacgccaagcttacaaacttgaaatacagaaatgtatttcactatttaataggaaa
ccttcgaaaggtattgattttataatcaagaccaagaaagttatcggatctcctgaagca
gtggcctcttttctaaagaatactgttggcttgaatccaacagctgttggggattacttg
ggtgaacgagatgacttcgcattaaaagttatgcatgcttatgtcgatggattcaatttt
gagaaaaaggattttggtgaagcaattagatatttccttcagggtttcaaattacctgga
gaagctcagaagatagatcgaattatggaaaaatttgccgagcgctactgcaaatgcaat
cctcactcatttaaaagtgcagatacagcttacatcctcgcatattctgtgatactgctc
aacacagatgctcacaacagtatggtcaaagataagatgaccaaagctgattttattcga
aacagtagcggaattgatgatgggaaggacttacctgaagagtatctcagtgctctatat
gatcagattgtgaagagtgaaattacaatgaatggtgaaaattctcaaccacaaagcaag
caggtcaatggactcaaccgattatttggtttggacagtatattgaatctggtcatggga
aagcaggcagaagagaagccctacggtgcaaatgggcctcttaaaaataatatccaagag
cattttaagtcaatatcgggaaaatctgaatctgttttatatgctgtctctgatgtatca
atattgaggtttatgacggaagtttgttggggtccaatgttggctgcatttagtatgaca
cttgaccggagtgatgacaagttagctacgtcagaatgcttgcaaggcttccgatattct
gtacatgtaacagcagttcttggtatggaaacacagagagatgcttttgtgacttctttg
gccaaatttacttacctccattgcgcggtagatatgaagcaaaaaaatatcaatgctatt
aagactattatgacaattgccattgaagatggaaattttctccaagatgcgtgggagcac
atcttaacttgtttgtccagatttgaacatctacaacttctaggggagggtgctcctgct
gatgcatcctttctaagcatctctagtggtgaagctgaactgaaatcacttaagtcaagt
gacctagcttctttaaagaagaaaggggcacttcataacccagctgtcgctgctgttgtt
cgaggtgggtcttatgatagcaatgcacatggtgttaactcccccaaattggtaactcca
gatcaagtcaataacttcattttaaatctgcacttgcttgatcaaattggaagctttgag
ttgaatcacatatttgctcatagccaaaggttgaacagtgaggcaatagtgtcttttgtg
agagctctttgcaaagtttcaatgtctgagttgcagtctccaactgatcctcgtgtgttc
agcctcacaaaaattgtcgaaattgcgcattataatatgaatcgcatcaggctagtttgg
tcacgcatctggaacgttctctcagatttcttcgtgtctgttggtctgtcagaaaatctt
tcggtggcaatttttgtaatggattcattgcgacagcttgctatgaaatttcttgagcgg
gaggaattggcaaattataatttccaaaacgaattcttgaggccatttcccattgtaatg
caaaagagcaactccacagaaattagagaactagtagtccgctgcatttcccagatggtt
ctcagtcgtgtcagtaatgtgaaatctggatggaaaagtgtatttatggttttcacaaca
gctgctggcgacgatcggaagagtgtagtattgttggcctttgagacaatggaaaagatt
gttcgagaatatttcctgtacataactgagactgaatctacagttttcactgattgcgtt
agatgcctgatcaccttcacaaatagcaaattgaatagtgatgtcagcttcaatgccatt
gcctttctgcgtttctgcgctgttaaactagcagaagggggactgttttccaacgatgat
agccagtatgccatttcatatgatatgcacagcagcgaggagtttttcaatggacatgca
cttgctaataaggatgagaatttctccttttggatgcctttgctcataggtttatcaaag
ttgacatctgatccaaggtccgaaatccgaaagagtgctttggaagtgcttttcaacatc
cttaaggatcatggaagcctcttttcacggcccttctggaatgttattttcaagtttgtt
gttttcccaatatttaacagccatgatgacaaggatgacagtgggatggatgttgaccag
tcagtacaatcttctagagactcgtcttttcagggaagtgcatgggattctgaaactact
ccagttgccgtagacggccttgttgatctgtttgttacttgcttcagtgtggtgaggtct
cagttgcctagtgcagtagcgatatttatggatttcattaagaattcaggtcatgcgcct
gcgaagactggaataagtgcattggtacgtttgaccaatgaattaggcaccacactgtcg
gaagacgattggaaaggcatttttatggccttaaaagatgctgcaagctccactatacca
ggatttctgaagctattgagaactatggataacttggaaatccctgatggcgcaaaatct
tataatggttttgaaacatcttctgagcatgaacaatccagcaacgatctggatgatgac
agcctgcaggttgcagcattggtcatccctagaacgaaaagtcatatttctgttctgctg
gttatcatacaggttgtatctgatcttttcaaagcgcatcacaatgatctttcaacagct
aatatcaagatcctcgttgaaatactttccatgatttcatcacatgccaatcaactgaac
tctgaaactggcttaatcctgaagcttcaacaagcatgcaatatcttggaactctctgag
ccacctgtggttcattttgaaaacgagtcattccagaattacttaaactttctcgatgat
ttattgttggaaagaggatccaactcagaagacattgacctggaagaccaaatttttggt
gtttgtgaaaatatattaaaaacatacctggagtgtgctgggaccctctcaggcaagcag
aaccctcccgaccagcaaatggcacaatgggtcctcccgttgccttcatctaaaagagat
gaactggctgcaagaactcctttgcttttgtcaggattaagaaccttgataaatttccag
aaagagtcaattaaaaagtacatttcgcgattacttcccttactgattgatcttatcgga
agtgaatacagctcaggtgaagtttcacttgttttgagtgacatgtttcaaacatgttta
gcccctgtacttgttgagtcatga
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integrated database retrieval system
