KEGG   Silene latifolia (white campion): 141599490
Entry
141599490         CDS       T11116                                 
Name
(RefSeq) protein PAT1 homolog 2-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141599490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slaf03019]
    141599490
Messenger RNA biogenesis [BR:slaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141599490
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     141599490
SSDB
Other DBs
NCBI-GeneID: 141599490
NCBI-ProteinID: XP_074275617
LinkDB
Position
1:complement(14276396..14285449)
AA seq 808 aa
METARIRHHGRPPLSSGSSSSLLSAIDSPSFHPQHSIDNSFFDASQYAFFGKHVAEEVEL
GGLEDEEDNLSSAGLPSDEYHLFDKDGGQDVGVVSLSDMDDLETTFSKLNRVVTGPRNPG
VIGDRGSGSLSRESSSVAEWSRDGLLDHTISDVNSASESTVWSSHPHSSSLPGDYKPLPR
AVSYPDQQLQQQQYLQQHFPSETLSTPQLSSFTSFPLPGDGARQPLSHRHSLPLNIPSMN
VAADSCNYFPGISPAHGLRYSGSMPGVSPVHGLSNQPRNQWSNQAGLLHGDHSRMLDSVI
QQHLTQHLLQQAIRQPISPLDHFSFLQSQLIGSHASAPSHVLRKYDTMYGIAEMRDHQRP
KSMRGKHNRFSQQGSDSAQKSECIQFRSKYMTSEEIDSILKLQHTSHSNDPYIDDYYHQA
SAAKKSSGSRVKPHFAPMHLRDVPSRVRNSGSDQHGHQSVDTLRRLALSSIRRPRPLLEI
EPPSPGCNDSSNEHRSLEQEPMFSARIAVEDAFTLILDVDDIDRVLRHNPPQDGGSQLRR
KRQVLLEALAAALQLVDPLGTGGSTVDPGDDIVFMRLVSLPKGCKLLSKYLELVVVTPRA
ASELVRVACMAVFRHLRFLFGGPPTKPEATEATAKLAKVVLTCVNAMDLRGLSACLAAVV
CSTEQPPLRPLGSTAGDHASVILKSLLDRATELLYDSNPQASLSFWKASFTAFFTLLTKY
CVSKYDTIMQSVVNQAQTNSEITRSETARAIRGEMPVELLRASLPHTDEHQRRMLMEFAQ
YSIPFPATGLNHCDDDGDGLIASESVRS
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggagactgctcggattcgtcaccatggccgacctccattatcctccggatcttcttct
tctctactttccgccattgattcaccttccttccaccctcaacactccatagataattca
ttttttgatgcatctcaatatgcgtttttcggtaaacatgtggctgaggaggtcgagtta
ggagggttagaagacgaagaagataacctttcttcagctggattgcctagtgatgaatat
catttgtttgacaaagatggggggcaggatgtaggtgtggtatctttgtctgatatggat
gatttggaaacaacattctcgaagttgaacagagttgtgacaggaccaaggaatccaggc
gtcattggtgatagagggtctggttcattgtcacgagaaagttcatctgttgcagaatgg
tcgcgggatggcttgttagaccacactatatcggatgtgaatagtgcatcagaatctact
gtgtggtcatctcatcctcattcgtccagtcttcctggggattataaacctttgcccaga
gcagtgtcctaccctgatcagcaactacaacagcagcagtatcttcagcaacacttccca
agtgagacattatcaactccacagttatcatctttcacctctttccctcttcccggtgat
ggagcccgacaacctttgtcacatcgccattcccttcctttgaatattccttccatgaat
gtcgccgcagattcctgtaattattttccaggaatttcccctgctcatggattacgttac
agtggaagtatgcccggtgtctcaccggtccacgggttgagtaaccaacctcgaaaccag
tggagcaaccaagcgggtttattgcatggtgatcattctaggatgctcgatagtgtaatt
caacaacatttaactcaacacctattgcaacaggcaatccgtcagccgatatcgccatta
gatcatttttcattcctgcagtcccagctcattggcagccacgcatcggcgccttcacat
gttttgagaaagtacgacacaatgtatggtatagctgagatgagggatcaccaaagacct
aagtcaatgcgcggtaaacataatcgtttcagtcaacaagggtctgactctgcccagaag
agtgaatgcattcagtttaggtccaagtatatgacttcagaggagatagatagtatattg
aagttgcaacatacttctcacagcaatgacccctacatagatgactactaccatcaagcc
tcagctgccaaaaaatcctcaggatcaagggttaagcctcactttgccccaatgcatttg
cgggacgtaccttctcgtgtacgtaatagtggttctgatcagcacggccaccagtcggtc
gatactctaagaaggcttgccttgtcttccattcgtaggcctcgcccacttcttgaaatc
gaacctccatccccaggatgcaatgacagtagcaatgaacacaggtctctggagcaagaa
ccaatgttttctgctagaattgctgttgaagacgcttttactcttattctggatgtagat
gacattgaccgtgttcttcgacataatccaccccaagatggtgggtcccagctacggcgc
aaaagacaggttttgcttgaagctttggctgcggcccttcagcttgttgatcctttaggc
actggcgggagtacagtggatccaggggacgatattgtattcatgcgcctcgtttctctt
cccaagggatgcaaacttctctcaaagtatcttgagctggtggtggttacccccagagct
gcaagtgagttagttcgagtagcttgcatggctgttttccgccatcttaggtttctgttt
ggtggtcctccaacaaagcctgaagctactgaggccacagcaaagcttgctaaggtagtt
ttaacttgtgtcaatgccatggatcttcgtggtctaagtgcttgtctcgctgctgttgtc
tgttctacagaacagccaccactacgcccacttggaagcactgctggggatcacgcttct
gtcatcttgaagtctttgctagatagagcaaccgaactactatacgactctaatcctcag
gcctctcttagcttctggaaggcgtcattcactgctttctttactctacttacgaagtac
tgtgtgagtaaatatgacacaatcatgcagtctgtagtaaaccaggcacagactaattca
gaaataacgagatcagaaacggcaagggctatacgtggggaaatgccagttgagctattg
cgtgccagtcttcctcacacagatgagcaccaacggagaatgttgatggaatttgctcaa
tactctattccttttcccgccactggtttaaatcattgtgatgatgatggcgatggccta
attgcctcagaatcagtcagaagttaa

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