Silene latifolia (white campion): 141599600
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Entry
141599600 CDS
T11116
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141599600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141599600
03041 Spliceosome [BR:
slaf03041
]
141599600
03032 DNA replication proteins [BR:
slaf03032
]
141599600
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
141599600
Spliceosome [BR:
slaf03041
]
Complex A
U1 snRNP components
Sm proteins
141599600
U2 snRNP components
141599600
Complex B
U1 snRNP components
141599600
U4/U6.U5 tri-snRNP components
141599600
Complex C
U2 snRNP components
141599600
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
141599600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
141599600
NCBI-ProteinID:
XP_074275768
LinkDB
All DBs
Position
9:37377252..37381824
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AA seq
131 aa
AA seq
DB search
MSRSLGIPVKLMHEATGHIVSVELKSGELYRGTMIECEDNWNCQLENITFTAKDGKVAQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLDAKIKGKSTSLGVGHGRAAAMRVKAAGGRAAP
VGRAVVPPVRR
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagcttgggaataccagtgaagttgatgcacgaagcaacaggtcacattgta
tctgttgaattaaaaagtggtgaactttatagaggaaccatgattgaatgtgaagataat
tggaattgtcaacttgaaaacatcacgtttactgctaaggacggaaaggtcgcccagcta
gagcatgtattcattcgaggcagcagagtcaggtttatgatcataccagatatgctaaag
aatgctccgatgtttaaacgtctagacgctaaaattaagggtaagagcacttctcttgga
gttggtcatggtcgtgcagcagccatgcgagtaaaggccgctggtggccgtgctgctcct
gttgggagggctgtcgtaccaccagtgaggaggtga
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