Silene latifolia (white campion): 141599601
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Entry
141599601 CDS
T11116
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141599601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141599601
03051 Proteasome [BR:
slaf03051
]
141599601
Membrane trafficking [BR:
slaf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
141599601
Proteasome [BR:
slaf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
141599601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
UBA_7
STI1-HOP_DP
Dsc3_N
Rad60-SLD_2
Ubiquitin_2
UBA_HOIP
XPC-binding
Motif
Other DBs
NCBI-GeneID:
141599601
NCBI-ProteinID:
XP_074275769
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Position
9:37438655..37446910
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AA seq
555 aa
AA seq
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MGADGDSSAAATTTTATATVGDEVSVNIRCSNNTKFSVTTSLESTVANFKAVVAQSSDVP
ADQQRLIYKGRILKDDHTLASYGLQADHTIHMVRGFAPSAANTPSGTANSGTPDTTPAAA
AARTTAPTEGGGLPGSGPGASLFPGLGLGGLGGTGASGLLGAGIPNIEQMQQQLNQNPNM
MRDIMNMPAIQSLMNNPDLMRNIIMNNPQMRDIIDRNPELAHILNDPSILRQTLETARNP
ELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTLAGDAGNNNSNPLSALL
GTQGAAGGQQRDGSNNPPATGAESAVPNTNPLPNPWSNTPGGTQTNSAQRTNPSGDARAA
PLGGLSSLPELDQMFGGIPDLSSVSQMMQNPAMSQMMQGLLSNPQYLSQIVNMNPQLRAM
TESNPQLREMMQNPELLRQLASPEMMQQMTSLQQSLFSSMNHPQTNQDPLQAGGAAGNGN
NMGLDMLMNMFGGLGAGGLTTPENSNVPPEELYATQLTQLQEMGFFDAQENIRALQATRG
NVHAAVERLLGNMGQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgacggagattccagtgctgccgccaccaccaccaccgccacagccacagtc
ggagatgaggtttccgtcaacatccgttgttcaaataacaccaagttttccgtcacaact
tctcttgaatcaaccgtcgcaaatttcaaggctgttgttgcgcagagctctgatgttcct
gccgatcaacagcgattgatctataaaggtcggatcttgaaggatgatcataccctagct
agctacgggttacaagcagatcataccattcatatggttcgtggctttgctccatctgct
gcaaacacaccttctggtactgcaaactctgggacacctgataccactcctgctgctgct
gctgcacgtactaccgcccctactgaaggtggaggcttgccaggttctggtcctggggca
tccttatttccggggcttgggttgggtggtcttggtgggacgggtgcgtctggcttgctt
ggagctggaatcccaaatattgaacagatgcaacaacaattaaaccaaaacccaaatatg
atgagagacataatgaatatgcctgccattcagagtttgatgaataatcctgatcttatg
cggaacattattatgaataacccccaaatgcgcgatatcattgatcgaaatcctgagctt
gcacacattttgaatgatcctagcattcttagacaaacccttgaaacagctaggaatcct
gaactcatgcgtgagatgatgcggaacactgatcgagcaatgagcaatatcgaatcatcc
ccagaaggatttaatatgcttaggcggatgtatgagaatgttcaggaaccatttcttaat
gccaccacgttggctggggatgcgggaaataataattcgaatcccctctctgctctattg
gggactcagggtgctgctggtgggcaacagagagatggatctaacaatccacctgcaaca
ggagcagaatctgctgttcctaacaccaatccactgcccaatccatggagcaatactcct
ggaggcacccagactaatagtgctcaaaggaccaatccctctggtgatgcaagggcagct
cctttgggaggcctaagtagccttcctgagttggatcaaatgtttggtggaattccagat
ttatcttctgtatctcagatgatgcaaaatccagctatgtcacagatgatgcagggtttg
ctctccaacccgcagtacttgagtcagattgtcaatatgaatccacaactccgggctatg
actgaatcaaaccctcagcttcgagaaatgatgcaaaatccggagcttcttcgtcagctg
gcctctcctgagatgatgcagcaaatgacgtctctgcagcagtcacttttctcttcaatg
aatcaccctcagacaaaccaagatccattgcaagctggtggtgctgcaggtaatggaaac
aacatggggctggatatgttgatgaatatgtttggtggtcttggagctggcgggttaaca
acaccagagaattcaaatgtgccacccgaagagctctatgcaactcagctaactcaactt
caagaaatgggcttttttgacgctcaagagaatataagggctcttcaggctacccgtggt
aatgtccacgctgctgtggagcgtttattggggaacatgggtcagtaa
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