Silene latifolia (white campion): 141600114
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Entry
141600114 CDS
T11116
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141600114
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
141600114
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
141600114
NCBI-ProteinID:
XP_074276397
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Position
9:140036312..140044709
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AA seq
435 aa
AA seq
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MADAAEPTAEPTPVSEETPAVEDSDIATTATAASSKWPGWPGDNVFRLIVPVVKVGGIIG
RKGELIKKLCDETRARIRVLDAPLGTPDRVVLISGKEEPDSSLSPAMDAVIKLFKRVTGL
SDGDDTSSTPDAAAFCSLRLLAASTQAIHLIGKQGSTIKSIQEASGAVVRILSEGDLPSY
ATSDERIVEIHGEAFKVQKALELVLGYLRKFLHDHSVVAVFEKTYNATISQEPTPDAWAD
KTQNLASTTLPQTITTGDPLLSYKREFYFDREPDVETKLTRSAMSLYGSDPAISGLHSTG
LTRAAAPIVTQVTQTMQVPLSYAEDIIGVAGTNIAHIRLSSGAALTVQECQGGGDEITVE
IKGTAMQVQTAQQLIQESINGSRSLVGSSIYGKSVLGLSSGYSQLSDNTYSSYASRSLGE
GYSSSSLGGYSSYRF
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagcagagcccacggcagagcccacaccagtatcagaagaaacaccagcg
gtagaggactcagacatagccacaaccgcaacggcagcctcttcaaagtggcccggttgg
cccggcgacaacgtatttaggctaattgttccagttgttaaagtaggtggtatcattggt
cgcaaaggggagctcatcaaaaagttgtgtgatgaaacccgtgcccggattcgggttctc
gatgccccgcttggtacccctgatcgtgtggtcttaatatctgggaaggaagaaccagat
tcgtcattgtctccagcaatggatgcagttataaagttgtttaagcgcgtcactggtcta
agtgatggtgatgacacttcttcaacacctgatgcagctgcattctgttcattaaggctt
ttggcggcatccacacaagctattcatctgattgggaagcagggatccacaattaaatca
atacaggaggctagtggtgctgttgtaaggattttatctgaaggtgaccttccttcttat
gcaacctctgatgagaggattgttgagatacatggtgaggcgtttaaggttcaaaaggca
ttggaattagttcttggttacctgaggaagttcttgcatgatcacagtgttgtagctgtg
tttgagaaaacttacaatgcaacaatctcgcaggaaccaaccccagatgcatgggcggac
aaaacccagaatttggcttccactactctgcctcaaacaataacgaccggtgatccttta
ctgtcatataagcgagagttttacttcgaccgtgagccagacgtagaaacaaaactcact
cggtctgcaatgtcactgtatggatcagatcctgccattagtggtcttcattctacagga
cttacacgtgctgccgcgcctattgtcactcaggtcacacaaacgatgcaagttccactt
tcgtatgcggaagatatcattggagttgctggaacaaatattgctcatattcgcctttct
agcggtgcagctctaactgtccaagaatgtcagggtggaggtgatgagatcactgtagaa
ataaagggcaccgcaatgcaagttcagacagcgcaacagcttatccaggaatccatcaac
ggttccagatcactggttggttctagcatttatgggaaaagtgtgctaggcttgagttcg
ggttattcacagctatcagacaacacatactcatcgtacgcaagccgaagtctgggtgaa
ggatacagttcctcaagcttaggaggctatagcagctacaggttttga
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