Silene latifolia (white campion): 141600166
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Entry
141600166 CDS
T11116
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141600166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141600166
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
141600166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
U-box
zf-RING_10
Rtf2
Motif
Other DBs
NCBI-GeneID:
141600166
NCBI-ProteinID:
XP_074276449
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Position
9:complement(155836421..155841989)
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AA seq
368 aa
AA seq
DB search
MRNEAGRFPDAAQPEIMRAAEKDEHYASFVSDACRDAFRHLFGARLAVAYHSQTKLIGQM
LYYILTTGAGHQTLGEEYCDILQIAGSYGLPPTPARRTLFVLYQTAVPYLAERMSSRIAS
RGMLLADSNFDEFGENNAPARSQLSNEIPSSSMSQVSSSSLARLKDKFRRCRLYIIQRWP
MVLPIAREVLQLFLRTNLMLFYFEGLYYHISKRASGIRYMFIGKPSNQRPRYQILGVFLL
IQLCVIGAEKLRRSNLSSLASSAQEISVGSYPLSAGQGLPMLNEDGSLITAGSENGSFPV
ESSSSSEVKGASKCTLCLSDREHPTATPCGHVFCWKCIMEWCNEKPECPLCRTPLTHSSL
VCLYHSDF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgaagcaggtagatttcctgatgcggcacagcccgagataatgagagccgcg
gagaaagacgagcattacgcctcctttgtctccgacgcttgtcgcgacgctttccgccat
cttttcggtgctagacttgctgttgcttaccatagccagacaaaacttataggacagatg
ctttattacattctcacaacaggtgcaggccaccaaacccttggcgaagaatactgtgat
atacttcagattgctggatcctatggacttcctccaactcctgcaagacgtacactattt
gttctttatcagactgcagttccttatcttgctgagagaatgagctctaggattgcgtcc
cgtggcatgctccttgcagattcaaattttgatgaatttggtgagaacaatgctccagca
aggagccaactgagtaatgagataccgtcgtcctccatgtcacaggtctcaagctcgtcc
ttggcaaggttgaaagacaaattcagaagatgtcgtttgtacataattcagagatggcct
atggtgctccctattgcacgtgaggttttgcagctgtttcttcggacaaatcttatgttg
ttctactttgaaggcctttattatcatatctcaaagcgagcatctggaatccgttacatg
tttattggcaaaccatccaatcaaagaccaagatatcaaatactgggagttttcctgtta
attcagctgtgtgtcattggtgctgaaaaactacggcgcagcaatttatcttcccttgca
agttcagctcaggaaatttctgtagggtcttacccactttcagcagggcaaggattgcct
atgctgaatgaagatggaagtttgatcactgctggctccgagaatggcagttttccagtt
gaatcgtcttcatcttccgaggtcaaaggagctagtaagtgtactctatgcctaagtgat
cgagaacaccctactgctacaccttgcggccatgtcttttgttggaagtgcattatggaa
tggtgcaacgaaaagccggaatgccctctatgtcgtacaccgttgacacattcaagtttg
gtttgtttgtatcactccgatttctag
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integrated database retrieval system