KEGG   Silene latifolia (white campion): 141600166
Entry
141600166         CDS       T11116                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    141600166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:slaf04121]
    141600166
Ubiquitin system [BR:slaf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    141600166
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 Prok-RING_4 U-box zf-RING_10 Rtf2
Other DBs
NCBI-GeneID: 141600166
NCBI-ProteinID: XP_074276449
LinkDB
Position
9:complement(155836421..155841989)
AA seq 368 aa
MRNEAGRFPDAAQPEIMRAAEKDEHYASFVSDACRDAFRHLFGARLAVAYHSQTKLIGQM
LYYILTTGAGHQTLGEEYCDILQIAGSYGLPPTPARRTLFVLYQTAVPYLAERMSSRIAS
RGMLLADSNFDEFGENNAPARSQLSNEIPSSSMSQVSSSSLARLKDKFRRCRLYIIQRWP
MVLPIAREVLQLFLRTNLMLFYFEGLYYHISKRASGIRYMFIGKPSNQRPRYQILGVFLL
IQLCVIGAEKLRRSNLSSLASSAQEISVGSYPLSAGQGLPMLNEDGSLITAGSENGSFPV
ESSSSSEVKGASKCTLCLSDREHPTATPCGHVFCWKCIMEWCNEKPECPLCRTPLTHSSL
VCLYHSDF
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgaggaatgaagcaggtagatttcctgatgcggcacagcccgagataatgagagccgcg
gagaaagacgagcattacgcctcctttgtctccgacgcttgtcgcgacgctttccgccat
cttttcggtgctagacttgctgttgcttaccatagccagacaaaacttataggacagatg
ctttattacattctcacaacaggtgcaggccaccaaacccttggcgaagaatactgtgat
atacttcagattgctggatcctatggacttcctccaactcctgcaagacgtacactattt
gttctttatcagactgcagttccttatcttgctgagagaatgagctctaggattgcgtcc
cgtggcatgctccttgcagattcaaattttgatgaatttggtgagaacaatgctccagca
aggagccaactgagtaatgagataccgtcgtcctccatgtcacaggtctcaagctcgtcc
ttggcaaggttgaaagacaaattcagaagatgtcgtttgtacataattcagagatggcct
atggtgctccctattgcacgtgaggttttgcagctgtttcttcggacaaatcttatgttg
ttctactttgaaggcctttattatcatatctcaaagcgagcatctggaatccgttacatg
tttattggcaaaccatccaatcaaagaccaagatatcaaatactgggagttttcctgtta
attcagctgtgtgtcattggtgctgaaaaactacggcgcagcaatttatcttcccttgca
agttcagctcaggaaatttctgtagggtcttacccactttcagcagggcaaggattgcct
atgctgaatgaagatggaagtttgatcactgctggctccgagaatggcagttttccagtt
gaatcgtcttcatcttccgaggtcaaaggagctagtaagtgtactctatgcctaagtgat
cgagaacaccctactgctacaccttgcggccatgtcttttgttggaagtgcattatggaa
tggtgcaacgaaaagccggaatgccctctatgtcgtacaccgttgacacattcaagtttg
gtttgtttgtatcactccgatttctag

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