Silene latifolia (white campion): 141600602
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Entry
141600602 CDS
T11116
Name
(RefSeq) ABC transporter G family member 39-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141600602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141600602
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
141600602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_23
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
141600602
NCBI-ProteinID:
XP_074276949
LinkDB
All DBs
Position
1:complement(19409619..19419239)
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AA seq
1132 aa
AA seq
DB search
MCADTIVGDDMRRGISGGEKKRLTIGEMLVGPAKFLLMDGISTGLDSSTTFKICKYIGEM
VHILDMTIVISLLQPTPETYELFDDIILLSEGQIVYQGPRDLILDFFEYVGFKCPKRKGV
ADFLQEVTSIKDQEQYWSKKDDQPYGYVSVSEFVQHYKSFQVGQKLMSDLSIPYDKSEAH
PNALVKKKYGLSNWQLLSVCFSREWFLMKRNSFLYIFKSAQITIMAIATMTAFFRTTMNH
QTAADGEKYLGAIFFSLTNFVFNGVAETTLTVMGLPIFYKQRDSLFYPAWAYALPVWVLR
IPISFMESAIWIILTYYTIGYAPAANRFFCQWLALFCIHQMALSLFRFVGAVGRTIVIAN
AVSMTLMLIMFVLGGFIIAKGDLSPWIKWGYYLSPMMYGQHALVINEFFDERWSTPNTDL
RIKEPTVGKVVLASRDFFEHQYWFWISIGALLGFSLLFNLLYIASLTYLNPSIDAKATVQ
DLDGRSKNKKIASPEELNDVNIETLNEKEDSSVDAKMPRKGMVLPFQPLSLAFNHINYYV
DTPSEMKSLGYGEDRLQLLQDVSGAFRPGILTALVGVTGAGKTTLMDVLSGRKTSGYFDG
NITVSGYPKNQATFARICGYCEQIDIHSPYLTVYESLFYSAWLRLSSNIDAKTRQIFIEE
VMKLIELEQLKDAVIGKPGINGLSNEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI
VMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQLTYAGPLGHNSHILVEYFE
AIRRVPKLKEGYNPATWMLDITSPQMETELNVDFAKLYANSSFYKKNQEIVEELSIPRPG
SGDIHFPTAHSQPLGVQFKACFWKQYRSYWQNPSYSGVHFLMMTVMGVLLGLMFWNKGSQ
MANEQDLMNFVGVMFSAILFLGGFNALDIQAIVASERAVFYRERAAGMYSALPFALAQLL
IEMLYLAIGSFIYVILMYSMIGFEWTFTKCFYFYYYIYMCFLYYTTYGMMLISLMPRPEF
SAILMTLFVTLWNLFAGFLLPRTQIPVWWRWFYWASPVAWTMYGLVTSQVGDKTSTIEVP
EIGSVPLSTYLKQVFGYEYDFLPFVVVAHLGWVVLFFLVFAYSIRIFNFQKR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccgataccattgtgggtgatgacatgagaaggggaatttctggtggtgaaaag
aagcgactaaccattggcgaaatgttggtaggacctgcaaagtttcttttgatggatggg
atatcaacaggtttagatagctcaactacattcaagatatgcaagtacattggcgaaatg
gtccatattttggacatgacaatagtcatatctctcttgcaacctactcctgagacgtac
gaattgttcgacgatataatcctgctttccgagggtcaaattgtgtaccaaggaccaagg
gaccttatccttgacttcttcgaatatgtcggattcaaatgccccaaaagaaaaggggta
gctgattttctccaagaagttacctctattaaagaccaagaacaatattggtctaagaag
gatgatcaaccttatggatacgtgtcagtgtctgaatttgttcaacattataaatctttt
caagtcggtcagaaactgatgtcggatcttagtataccttatgataaatctgaagctcac
cctaatgctttagtgaagaaaaagtatggtctttccaactggcaactgctaagtgtttgt
ttttcaagggagtggtttctgatgaagagaaactcatttctgtatatattcaagagtgcc
caaataacaataatggcaatcgctacaatgactgccttttttaggacaacaatgaaccat
caaacggcagcagatggagaaaaatacttgggagctatcttctttagcctcacaaatttt
gtgttcaatggagtggcagaaactacattgactgtaatggggctccctatattctacaaa
caaagggattctctgttttatccagcttgggcatatgcattaccagtttgggtccttcgg
attcctatttcgtttatggagtcagctatttggattattcttacttattacacaattggc
tatgctccagcagcgaatagattcttttgccagtggcttgctttattttgtatccatcaa
atggcattatccctattccgttttgttggtgctgttggaaggacaattgtgatcgctaat
gcggttagtatgacgcttatgttgattatgtttgtccttggtggtttcattattgccaaa
ggtgaccttagcccttggatcaaatggggatactatctttctcctatgatgtatggacaa
catgctttagttattaatgaattttttgacgagagatggagcacgccaaatacagactta
cgaatcaaagaaccaaccgttggcaaagttgtacttgcgtcacgagacttctttgaacat
caatattggttctggataagcattggggcactccttggcttttctcttctcttcaacctt
ttatacatcgcgtcactgacttacttaaatccttccattgatgcaaaagccacagtgcaa
gatcttgatggtagatccaaaaataaaaaaattgcctcacctgaagaacttaatgacgta
aatattgagactctaaatgagaaagaagattcaagtgtagatgccaaaatgcctcgaaag
ggaatggtgctaccttttcagcctctttctctagcattcaatcacatcaattactatgtg
gatacgccttctgagatgaaaagtctaggctatggggaagatcgcttacagttactgcaa
gatgtgagtggagcatttaggcctgggatattaacagcactcgtgggtgtaacaggagct
ggaaagacaactctgatggatgtgttgagtgggaggaaaacaagtggctattttgatggc
aacatcactgtctctggttatccaaagaatcaagcaacattcgctcgaatatgtggttac
tgtgagcaaatcgacattcattctccatatctcacagtctatgaatccctcttttactct
gcctggcttcgtctttcttcaaatattgacgcaaaaacaagacagatatttattgaagaa
gtcatgaagctgattgagcttgagcagctgaaagatgctgtaataggaaaaccaggaata
aatggattgtcaaatgaacaaaggaagagattaacaatagctgtggagttagttgcaaac
ccttccattatattcatggatgagcctacatctggacttgatgctagggctgccgcaatt
gttatgcgcactgtcagaaacactgttaatactggaagaactgtggtgtgtactatccat
caacccagcatagacatctttgaagcctttgatgagctcctactaatgaagagaggagga
caactgacttacgcgggacccctcggacataattcccatatacttgttgaatacttcgag
gccattcgtagagttcctaaattaaaagagggctacaatccagccacatggatgcttgat
ataacttcccctcagatggaaactgaattaaatgtagattttgccaagctttatgccaat
tcctcattttacaagaaaaatcaagaaatagttgaagagcttagtattccgaggccaggt
tcgggggatatacattttccaactgcacactctcaaccactgggcgttcaatttaaagca
tgtttttggaaacaatataggtcttattggcaaaatccatcttacagtggcgttcatttc
cttatgatgacagtcatgggtgttttgcttggtcttatgttctggaacaagggaagtcaa
atggcgaatgaacaagatttgatgaactttgtaggagtgatgttttctgccatccttttt
ctgggtggatttaatgccttagatatacaagctattgttgcaagtgagagagcggttttc
taccgcgaaagagcggcaggaatgtactcagctctgccatttgccctagctcagctactt
atagagatgctttaccttgcaattggatcattcatatatgtcattctcatgtactcgatg
atcggatttgagtggacttttaccaaatgcttctacttctattactacatttacatgtgc
tttttgtactacaccacgtatgggatgatgcttatttcactgatgccacgaccggaattt
tcagccattttgatgactttatttgttaccttgtggaatctatttgctggatttttgctt
cctagaacgcaaataccggtatggtggaggtggttctactgggcatccccggtggcatgg
acaatgtatggtttagtgacctcacaagtgggtgacaagacttctactattgaagtgcct
gaaattggaagtgtgcccttatctacatacctcaaacaagtctttggttatgaatatgat
tttctgccctttgttgttgttgcccatcttggctgggtggtcctcttcttccttgtgttt
gcctacagcatcaggatttttaacttccaaaaacgatag
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