KEGG   Silene latifolia (white campion): 141600831
Entry
141600831         CDS       T11116                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03018  RNA degradation
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141600831
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141600831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slaf03019]
    141600831
   03041 Spliceosome [BR:slaf03041]
    141600831
Messenger RNA biogenesis [BR:slaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141600831
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     141600831
Spliceosome [BR:slaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    141600831
SSDB
Motif
Pfam: LSM Hfq DUF150_C
Other DBs
NCBI-GeneID: 141600831
NCBI-ProteinID: XP_074277188
LinkDB
Position
1:19810204..19814585
AA seq 99 aa
MSNRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESLRDPDDPLKT
IDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFVQQDAV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctaacaggaaggaaacagttctagatcttgccaagtttgtagataagggagtgcaa
gtcaagctcactggtggaagacaagtaactggaacactaaaaggatatgaccagttgctg
aaccttgtgctggatgaagccgtcgaatctctgagagatccggatgacccgctcaagact
attgaccagacccggagtcttggattaattgtttgtagaggaacagctgtgatgctagtc
tccccaactgacggaacagatgaaattgcaaatccgtttgtccagcaagatgctgtttaa

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