Silene latifolia (white campion): 141600922
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Entry
141600922 CDS
T11116
Name
(RefSeq) nuclear ribonuclease Z-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141600922
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
141600922
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
141600922
Prokaryotic type
141600922
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GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Phage_Capsid_P3_N
Motif
Other DBs
NCBI-GeneID:
141600922
NCBI-ProteinID:
XP_074277282
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Position
1:20336117..20341491
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AA seq
279 aa
AA seq
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MVKDGLEIEGYKIEGISIAGQETCVMVPSLSIAFDIGRCPRRAVNQQFLFISHGHMDHIG
GLPMYVATRGLYSMKPPTIFVPSVIKEHVERLFDVHRAMDFSELKHTLIGLDVGEEVCIR
RDIKVKAFKTYHAIPSQGYIVYSIKQKLKQEYVGLPANEIKELKLSGVEITNTITSPEIA
FTGDTTADFIVDPANVDVLRAKVLVMECTFLDDQATVAHAREYGHTHLDEVVNYAEMFQN
NAILFIHFSARYQAYEILEAVSRLPKAFAGRIFTLTEGF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggatggattggagatagaagggtataaaattgaaggaatttcaatagctggg
caagagacttgtgtaatggttccctctcttagcattgctttcgatattggaaggtgtcct
cgtcgcgccgtcaatcaacagtttctcttcatttcccatggccacatggatcacattgga
ggactgcctatgtatgttgcaactcgtggtttatattctatgaaacctcctaccatattt
gtgccaagcgttataaaagagcatgtggaacgtctttttgacgtgcatagagccatggac
ttctctgaactgaagcatactttaatcggtctggatgttggagaagaggtctgtattagg
agggatattaaagtgaaagcatttaagacatatcatgccattcctagtcagggctatata
gtttattcaatcaagcagaagcttaagcaagagtatgtcggcctgcctgcaaatgagata
aaagaattgaagttatctggcgtcgagattaccaataccatcacttcacctgagatagca
tttacaggagatacaacggctgactttattgttgatccagctaatgttgatgtgttgaga
gcaaaagttcttgttatggagtgcaccttcttagatgaccaagctactgttgctcatgca
cgagaatatggacacacgcaccttgatgaggttgtaaactatgctgagatgtttcagaat
aatgcgattcttttcatccacttctcagcacggtaccaagcatatgaaatcctggaagct
gtgtccagattgcccaaggcatttgctggccgaatttttacccttactgaagggttctga
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