Silene latifolia (white campion): 141601938
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Entry
141601938 CDS
T11116
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141601938
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP100
141601938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_28
AAA_18
NACHT
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
141601938
NCBI-ProteinID:
XP_074278349
LinkDB
All DBs
Position
1:27956114..27963905
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AA seq
923 aa
AA seq
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MAGALLQSTNIPATFAYQRNGQFHRSGKSRKAVKMMATLQAPGYQINSFSGLRGSNSLDT
LGSTNDCFYTKMRAVLSVRRGTASRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENTETVG
AGVGGGTSGNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDSLEAAARLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNDAVRGQDFEKAGELRDREMD
LKAQITAMIEKNKEMSKAETEAGDVGPVVTEVDIQHIVASWTGIPVDKVSADESDRLLKM
EDTLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDQKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFGRLKSKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLSREIKEGDSVIVDVDSD
GNVIVLNGSTGAPPEFLPEVITV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctttacttcaatccactaatatccctgctacatttgcctatcaaagaaat
ggacaatttcatagatcaggaaagagtagaaaggctgtgaaaatgatggccacccttcaa
gcacctgggtatcaaataaatagtttctcggggttgcgtggtagtaattctttggatacc
ttaggatctactaatgattgtttttataccaaaatgagggcggttttatctgtacgaaga
gggacagccagccggggtgtggttagagcaatgtttgaacgtttcactgagaaagctatt
aaagtaatcatgcttgctcaagaggaggctagacggttaggacataattttgtcggcact
gagcaaattctgttgggtcttattggggaaggcacaggtattgctgccaaggttctaaag
tcaatgggaattaatctcaaagatgcccgtgtagaagttgagaagataattggaagaggt
agtggttttgttgctgttgagattccgttcactcctcgtgcgaagcgtgtgttggaactt
tcactggaggaagctcggcaacttggacacaactatattggatctgaacacttgcttttg
ggacttcttcgtgagggcgagggagttgctgctcgcgttctagagaacttgggagctgat
ccaagtaacattcgaacacaggttattcgtatggtgggtgagaacacagaaactgttggc
gctggcgttggtggaggcaccagtggaaataagactcccaccttggaggagtatggaaca
aatctgacaaagcttgcagaagaggggaaattggatcctgttgttggaaggcagccacaa
attgagcgtgtaacccaaattcttggcagaagaacaaagaacaacccttgtcttattggt
gagccaggagttggcaaaacagctattgctgagggccttgcacaaagaatagcaactggt
gatgttcctgaaacaattgagggaaagaaggttataaccctcgatatgggtcttctggtt
gctggaacgaaataccgtggagagtttgaggaaagactgaagaagttgatggaggaaatc
aagcagagtgatgatataatcctttttattgatgaggtacacactttgattggggcagga
gcggcagaaggagcaattgatgctgccaacattttaaaacccgctcttgcaagaggtgaa
ttacagtgcattggagccaccacccttgatgaatacaggaaacatatcgagaaagatcct
gctctagagagaaggtttcagcctgtgaaggtgccggaaccaacagtagatgaaaccata
caaattctgaaagggcttcgtgaacgttatgagatacatcataagcttcgctacactgac
gattccctggaggcagcagcacggctttcttaccagtatatcagtgaccgtttcctgcct
gataaagctatagatcttattgatgaagctggttctcgggttagattgcgccatgcacag
ctgcctgaagaagctagggagcttgaaaaagaactccgacaaattacaaaggaaaagaat
gacgctgtccggggccaagactttgaaaaggccggagagttgcgtgaccgagaaatggac
ctcaaggcccaaataaccgctatgatcgagaaaaacaaggaaatgagcaaggctgaaacc
gaagctggtgatgtggggcctgtcgtgacagaagtggacattcagcatattgtcgcttct
tggactggcattcctgttgacaaagtgtctgccgatgaatctgaccgtctccttaaaatg
gaggacacacttcataccagaattatcggtcaagatgaggctgtaaaagccattagtcgt
gccattcgtcgtgctcgtgtaggtctcaagaatcccaaccgtcctatcgctagctttata
ttctctggcccaactggtgttggcaaatccgagcttgcaaaagccttagctgcctactac
tttggatctgaagaagccatgatccggcttgatatgagtgagtttatggagagacacacc
gtctccaagttaattgggtcacctccaggttacgtgggttacaccgagggtggtcaacta
acagaagccgttaggcgtcggccttacacggtggtgctctttgatgaaatcgagaaggcc
catcctgatgttttcaacatgatgcttcaaatactcgaagatgggaggttgaccgatagc
aaaggccgaacggttgactttaagaacaccctcctaattatgacatcaaatgtcggaagc
agcgttattgagaaaggtgggcgtaagatagggttcgacctcgactacgaccagaaggat
agcagttacaacagaataaagagcctggtgacagaggagttgaagcagtacttccgaccc
gagttcttgaatagattggatgagatgattgtgttcaggcagctaacaaaattagaggtg
aaggagattgcagatataatgttgaaagaagtttttgggaggttgaagtccaaagagatt
gaactccaagtaaccgagagattcagagaccgagtggtggacgagggttacaacccgagc
tatggggctcggcctttgagaagagccattatgagacttctggaggacagcatggccgag
aaaatgctctcccgtgaaataaaagagggagactctgtgatcgtggatgtcgactcagac
gggaacgttattgttctcaacggtagtaccggtgcgcctcctgaattcttgcctgaggtt
atcacagtctga
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