Silene latifolia (white campion): 141603316
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Entry
141603316 CDS
T11116
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141603316
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
141603316
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Acyl-thio_N
Motif
Other DBs
NCBI-GeneID:
141603316
NCBI-ProteinID:
XP_074278994
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All DBs
Position
1:complement(35794795..35796738)
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AA seq
424 aa
AA seq
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MTSNTKLSSQTLALVLGFIFFLCHAKAIRLVSSAPTVFDVTKFGAKGDGKPVYNEDGESS
VGMAFIQAWLKACNSIGPATVLIPKGTYAVAQVIFNGPCQSSVTVELQGNIIADPDVSQF
PNNQLLVFEEVEGAKLVGGGSIAATRPSSQVTPMDPEKPFVYSELMPSVSLLKVVKFEMS
GVRSLNPESFHVLVDNSHEVSITNVNFDSTNMRPVARSDAIFISMSSLVTVTNSQIKVGD
ACVTVSGGSKDVTISGLTCNYGHGIRVGAQAHETPDYNVNKVKVTNCTFKATKSAVTINP
RPQSALGQVSDINFEDLVMDQVHTALTIKQDYLSTPDKPHNAKVSNIHFKNIKGTSIANI
AVSFTCSKRTPCEGIEIADIDLKYTGQSLMGKLFSHMAICDNAKVAFIGKHDTLNCKSNS
NGNI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtaacacaaaattatctagccaaacattagcccttgtattaggatttattttc
ttcttatgtcatgcgaaagctattaggcttgtttctagtgcaccaactgtttttgatgtt
accaaattcggagccaagggcgatggaaaacccgtgtacaatgaagatggcgaatcaagt
gtcggaatggcatttatacaagcatggttaaaggcttgcaatagcattggaccagcaacc
gtattaattccgaaaggaacatatgcggtggcacaagtgatatttaacgggccatgtcaa
tctagcgtaaccgtagaactacaaggaaacattattgcggatccggatgttagtcaattt
cctaacaaccaattattagttttcgaagaagtcgagggtgctaaactcgttggtggtggc
tccattgctgctacacgaccttcttcccaggtcactcctatggaccctgagaaaccattt
gtttacagcgaactcatgcctagtgtctcgcttctcaaggtggtaaagtttgaaatgagt
ggggtacgatccttgaatccagagtcatttcatgtgttggttgataatagtcatgaagtg
tctattactaatgttaactttgattctacaaatatgagacctgtcgctcgctctgatgcc
atcttcataagtatgtcaagtttggttacggtaactaatagtcaaattaaagttggagat
gcttgtgttaccgtatctggtggttctaaagatgtgaccattagtggactcacttgtaac
tacggacacggcattcgtgttggagcccaggctcatgaaactccggactataacgttaac
aaagtcaaagtaaccaattgcacattcaaagcaacaaaatctgctgttacgatcaaccct
cgtccacaatcagcactcggtcaagtaagtgacataaactttgaggatttggtgatggac
caagtacatactgcgttaactatcaaacaagattacctctctacacctgacaagcctcat
aatgcgaaagtgagtaatatccacttcaagaacataaagggtacaagtattgcaaatata
gcagtttcattcacttgcagcaaaagaactccatgtgagggtattgaaatagctgacatt
gatctcaagtatacaggacaatcattaatgggaaaattatttagtcatatggctatttgt
gacaatgctaaagtagcatttattggtaaacatgataccttaaattgtaagagcaactcc
aatggtaacatttag
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