Silene latifolia (white campion): 141603644
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Entry
141603644 CDS
T11116
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141603644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141603644
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
SR proteins
141603644
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
141603644
NCBI-ProteinID:
XP_074279014
LinkDB
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Position
1:37138616..37144110
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AA seq
297 aa
AA seq
DB search
MSGRSDRTLYVGNLPGDIREREVEDLFYKYGPIKHMDLKIPPRPPGYAFVEFEEARDAQD
AIDGRDGYDFDGHRLRVELAHGGRGHSSSTARSNNNSGDRRGVSKHTEYRVLITGLPNSA
SWQDLKDHMRRAGDVCFSQVFRDGGGTTGIVDYTNYEDMKNAIRKLDDTEFKNAFSRAYV
RVKEYKGSPSPGRGRSRSRSRSRGRSYSRSRSPSKPLKKASRRSPARSRSRSKSKSPPVS
RSPSRSRSPLPPGKKNVSKSPKKRSLSPRRSRSRSPSKGKKSLSRSRSRSRSKSLSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggcgatctgatagaacgttgtatgttggtaatcttcctggagatatcagggag
agagaagttgaagatttgttttacaaatatggtcccattaagcacatggacttgaagatt
ccccctaggcctcccggttatgcttttgttgagtttgaggaggccagggatgcccaagat
gctatagatggccgtgatggctatgactttgatggccaccgtcttcgggttgagctggcc
catggtgggcgtggtcactcatcatcaactgcacgctctaataataatagtggagatcgt
cgtggtgtctcaaaacacactgaatatcgagtgcttattactggattgccaaactctgct
tcctggcaagatttgaaggatcacatgcgtagggctggagatgtttgcttctcccaagtt
ttccgtgatggtggtggaacaacgggaattgtggactacacaaattatgaagacatgaag
aatgctatcaggaagcttgatgacacagaattcaaaaatgcattctctcgggcatatgtg
cgggtcaaagaatataaaggcagccctagtcccggaagaggtaggagcagaagccgcagc
cgcagccgtggccgtagttatagcaggagtcgtagtccaagcaagccactgaagaaggct
tctcggcggtcacctgctagatcccgttctcgatcaaagtcaaagtctcctcctgtgtcg
agatctccgtcaagatccagatcaccactgccgcctggtaagaaaaatgtgagcaaaagc
cccaagaagcgtagcctcagtccccgtcgtagcaggagcaggagcccgagcaagggtaag
aagagcctaagcagaagcagaagcaggagcaggagcaagagcctgtcaaggtga
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