Silene latifolia (white campion): 141604718
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Entry
141604718 CDS
T11116
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141604718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141604718
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
141604718
SWR1 complex
141604718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
141604718
NCBI-ProteinID:
XP_074279283
LinkDB
All DBs
Position
10:complement(3343733..3360701)
Genome browser
AA seq
2120 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALESPREPRRPKAHWDHVLEEMLWLSKDFEAERKWKLAQA
KKVALRASRGMLDQATRGERRIKEEEQRMRKVALNISKDVKKFWTKIEKLVLYKHQLELD
DKKKKALDKQLEYLLGQTERYSNMLAENLVGASTSCAPGRPSLTFNNQQRDSDGNTVDKS
MMLLGDSKSDTEIKATEMEVDANSVILSQNVLDTSKSCPSELSMQEDTSLSQEKTDEIKA
VESLKLLAASTEVKLDSDIKTDNVEGDEDYNVLSVDESDDDERTIEQDEALITEEERQEE
LAALKNEVDLPLEELLKRYSTSEVNGESCPDRHGVDTDGLHEVVPDSHKSEDNYDSLHVL
KTNGVVSTGMGKSNGVLKVVNHFSEIEACPHKNESNCMNGSGFVNMDYDSSDEQGDDEFD
IATVEEKDDETTLAEEEELAKADSSEPADEISLLQKESEVPLEELLARYNMDFANHDSTN
DESDSLSDNSDVESSPVVKKLERGVRDNVLVEGDIFLEAKPASTSSPEAVNSSQLIEPEE
ESQRDARIADAAAAARSAQPTGNTFSTTNVRTKYPFLMKHSLREYQHIGLDWLVTMYEKR
LNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKIL
TYFGGAKERKYKRQGWMKPNSFHVCITTYRLVIQDSKCFKRKKWKYLILDEAHLIKNWKS
QRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVD
GQEKVNKEVVDRLHNVLRPFLLRRLKRDVETQLPMKKEHVIYCRLSKRQRNLYEDFIASA
ETQATLANSNFIGMLSVIMQLRKVCNHPDLFEGRPIVSSFDMVGLEMQMSANVCSLLSSH
PFSSPDLSGLGFVFTHLDFTMTSWESDAVQSIATPSRLIESRASSNMLDLVRPSFKYGKK
CPGSNIFEEIRNAIFEERLNEVKQRASAIAWWNSLRCRKKPVYSTTLRKLLTIKHPVQLH
KENSVSYDFSSKLADIVLSPVERFQKMIDQVEAFMFAIPAARAPPPACWCSKSETSILID
PVYKEQCSKIILPLLTPIRPAIVRRQLFFPDRRLIQFDCGKLQQLAVLLRRLKSEGHRAL
VFTQMTKMLDILEAFINLYGYTYVRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGV
GINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLVSESTIEENILKKANQK
RALDDLVIQSGGYNTEFFKKLDPMELFSGHKIAPVRDVGKGKEGDGGEVLVSNADIEAAL
RNAEDEADYMALKKVEEEEAVENQEFTEEAIGKLEDEDFANEDATKIDESVDQGALIVAS
NSAMDSRTNDLEGEKALTLACNEDDVDMIADVKQMAEAAAAAGQEVLSFENQLRPIDRYA
IRFLELWDPIIDKNAVEHQAQFEEREWELEKIERLKEDMEAEIDDEDEPLVYEKWDAEFA
TQAYHQQVEALAQHQLMEEMEIKAKEMENENVDDDYLMKNQASSSSKRKNKKKKTKKAKF
KSLKKGSLASATKVFHEEDDVEYVSSDNEDNFHETTPRSEISPTGIILLRKRKKDEMAPA
AVEEKITKIKFKKPKKTALVTKLGPTESNVLSISHEELKDARPVEDGGEDLEPKLTGRAK
MGVKILIPASPMKRIYTIKPEKLKKKGNMWSSDGFPSPDSWLPQEDAVLCALVHEYGPNW
SLVSDVIYGMTAGGLYRGRFRHPVLCCERFRELVQKYVHAVADTPNSEKPSTTAPTKGPL
RVTEDNIRVLLDAAMEQPDRELLLQRHFTALLTSVWRMTSSLNQQRNRSITPNHLSPSIR
LFGTSVNPNAQTPAIGGSKKSFNRSHVKLITTALHDAENLGPDGPVSNLMEEDPPTIEKL
DVVVEFGKEESEMGDLTVGFPSMVSLSISNLEALSPLKIASKENQLRFSQQLAESRLRDS
STACLHGVLGWASSVFPIIEHRSRSSFKSPSSGKHKLGVGESSRSSKSKVRKLMGEQPDT
NLALSDLSLQLLPSLSEKNPTSTSGSYITQPLDGSFENLLNDIPIGLDDTDNPEMVPHCY
NPDFLSGLDDCSLLESMDIG
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaaggcccgaggtcgaagctcgatcacgagacgagagcgaggcgtcagaag
gcgcttgaatctcctagagaacctcgccgtcctaaagcacattgggatcatgttttggaa
gagatgctctggttatcaaaggactttgaggctgagaggaaatggaagttagcacaggca
aagaaggttgctttacgagcaagcagaggcatgcttgatcaggcaacaaggggagaaagg
agaattaaggaagaagagcagcgcatgagaaaagttgctttgaatatatcgaaggatgtg
aagaagttctggactaaaattgagaagctggttctttataagcatcagctggagctagat
gacaaaaagaagaaagcactcgacaaacaattggagtatctcctgggtcaaactgaaagg
tattcaaatatgctagcagaaaatctcgttggtgcatcaacctcgtgtgctccaggacgg
ccatctttaacttttaacaatcagcagagagacagtgatggaaatacggtggataaatct
atgatgttacttggtgactcgaagtcagatactgagatcaaagccactgaaatggaggtt
gatgcaaattcagtcatcctatcccagaatgttttggacacatcaaagtcctgcccatca
gagctatctatgcaagaagacacgtctctcagtcaggagaagactgatgaaataaaagcc
gtggagtccttgaaactacttgctgcttctacagaggtgaaattggactcagatattaaa
acagataacgtggagggtgatgaagattataatgttttgtctgtggatgagtcggacgat
gacgagcgtaccattgagcaagatgaggctttgataactgaagaagaaaggcaggaggaa
ttggctgctttaaagaatgaagtagatttgcctctagaggagctactcaaacgctattcc
acgagtgaagtcaatggagaaagttgtccagacagacatggtgttgacacagatggcctc
catgaggtagttcctgatagtcataagagtgaagataactacgactctctccatgtgtta
aaaacaaatggtgttgtctcgacaggaatgggaaaaagcaatggtgtcttaaaggtcgtc
aaccatttttctgaaattgaggcctgtccacacaaaaatgaatcaaattgcatgaatggt
tctggctttgtaaatatggactatgactctagtgatgaacagggagatgatgaattcgat
attgccacagtagaggaaaaggatgatgagacaaccttagcggaggaagaggaattggca
aaggcagattcaagtgagcctgcagatgagatttccttactgcagaaggaaagcgaagtt
cctctagaagaattgcttgcaagatataatatggattttgccaaccatgattctactaat
gatgagtcagattctctctctgataactctgacgttgagagttctccagtagttaaaaag
cttgaacggggggtacgtgataatgttttagttgaaggggatatatttcttgaggcaaaa
ccggcttcaacctcctccccagaagcagttaattcgtcacaattaattgagcctgaggaa
gagagtcagagagatgctagaattgctgatgcagccgccgccgctaggtcggcacagcca
acagggaacactttctcgacgactaatgtgcgaacaaagtacccctttcttatgaagcac
tctctgcgggagtatcagcacattggtcttgactggctagtgaccatgtatgagaaaaga
ctcaatgggattcttgctgatgagatgggtctcggaaagaccatcatgacaatcgcatta
ctcgcccacctggcatgtgagaagggcatatggggtccccatctcatcgtggtacccacc
agtgtcatgttaaactgggaaaccgagtttctgaaatggtgtcctgcttttaagatttta
acttactttgggggtgccaaggaacgcaaatataagaggcaaggttggatgaagcccaac
tctttccatgtttgcataactacttacaggcttgttatccaggattcaaaatgtttcaag
cgcaagaaatggaaatatctgatattagatgaggctcatcttataaagaactggaaatct
cagcggtggcaaactcttttaaactttaattcaaaacgacgcatattacttactggtact
ccattgcagaacgatttaatggagttgtggtctctaatgcattttttgatgccccacatc
tttcagtctcaccaggaatttaaggactggttttgtaatccaatatcaggcatggtggac
ggtcaagaaaaggtgaacaaagaagtggttgatcgcctacataatgtcttgcggccattt
ttactccgtcgattgaaaagagacgttgagacacaacttcctatgaaaaaagagcatgtt
atatattgcagactctcaaaacggcaaaggaatttgtatgaagatttcattgctagtgca
gaaacacaagctactttagctaattcaaacttcattggtatgttgagtgttataatgcag
cttcgcaaagtttgcaatcatcctgatttgtttgaaggccgtcccattgtaagttctttt
gacatggtggggcttgagatgcagatgagcgctaatgtgtgctcactactttcctcccat
ccattttcttctccagatctttcaggtttagggtttgtatttacacatcttgatttcacc
atgacatcttgggagagtgatgcagttcagtctattgccactccctctagattaattgaa
tctcgtgccagctctaatatgcttgacttggtaaggcctagctttaagtatgggaagaag
tgtcctggatcaaacatcttcgaagaaatacggaatgcaatctttgaggagagattaaac
gaagtaaaacaacgtgcatctgccattgcctggtggaactcattgaggtgtcggaaaaaa
cccgtttactcaacaactttgcgtaaacttctgactataaagcatcccgtacaactccat
aaggaaaattcagtgtcatatgatttctcttcaaagcttgctgacattgttttgtcaccc
gtggaacgtttccagaagatgatagatcaggtcgaggctttcatgtttgctatcccagca
gctcgagctcctccccctgcttgttggtgcagtaaatccgagacttctattttgattgac
cctgtctataaggaacaatgctctaagatcatattgcctcttttgactcctatacgacct
gctattgttaggaggcagttatttttcccagacaggcgcttgatccagtttgattgtgga
aagctccagcaacttgctgttttgctcaggagattgaaatcagagggtcacagagcgttg
gtattcactcagatgacaaagatgcttgacatattggaagcttttataaatttgtatggg
tatacatacgtgcgtttggatgggtccacacaacccgaggagagacaaacgttgatgcag
cggtttaatactaacccgaagatatttttatttatcttgtctactcgtagtggaggtgtt
gggattaaccttgttggggcagacactgtaatattctatgatagtgactggaatcccgct
atggatcagcaagctcaagaccgttgtcatcgcattggacaaactcgtgaagtccatata
tatcgtttagtcagtgagagtaccattgaagagaacatcttaaagaaagcaaatcagaaa
cgagctcttgatgacctagtaattcaaagtggtgggtacaacactgagtttttcaagaaa
cttgatccaatggaactgttctctggtcacaaaattgctcccgttagagatgtagggaaa
ggaaaggaaggtgatgggggtgaggttcttgtttctaacgctgacatagaggctgctctg
agaaatgctgaagacgaggctgattacatggctctaaagaaagttgaagaggaagaggct
gttgaaaaccaagaatttacagaggaagccattggaaaattggaagatgaggacttcgca
aatgaagatgctactaaaattgacgaatctgtagatcagggtgccttgattgttgcttca
aacagtgcaatggattcaagaacaaatgatttagagggagagaaggctcttactttggct
tgcaatgaagatgatgttgacatgatagcagatgtcaaacaaatggcggaggcagctgca
gctgctggacaagaagtcttgtcattcgagaatcaattacgtcctatagataggtatgcg
attcgtttcttggagctttgggacccaataatcgataaaaatgcggttgagcatcaagct
cagtttgaagagagagaatgggaattggagaaaattgagaggttaaaagaggatatggag
gcagagattgatgatgaggatgaacctctggtttatgagaaatgggatgctgagtttgct
acccaagcatatcaccagcaagttgaggctttagctcagcatcagttgatggaagaaatg
gaaatcaaggccaaggagatggaaaatgagaacgttgatgatgattatctaatgaagaat
caagcctctagcagttctaaaagaaagaacaagaaaaagaaaacgaagaaagcaaagttc
aaatctcttaagaagggatctcttgcttctgcaaccaaagttttccacgaagaggatgat
gtagagtacgtgtcgtcagacaatgaagataattttcatgaaacaactcctcgctcggag
atttcaccgactggtatcatattacttagaaaacgaaagaaagacgagatggcccctgct
gccgtagaagagaaaatcacaaaaatcaaattcaaaaaaccgaagaagactgctcttgtg
acaaagctgggtcctacagagtcgaatgtgttgagcatctcacatgaagaattaaaagat
gcaaggcctgtagaggatgggggagaagatctagagccgaaactcaccggcagggccaag
atgggtgtgaaaatcttaattcctgcttcgccgatgaagagaatttatactataaaacct
gagaagctgaagaaaaaaggaaatatgtggtcaagtgatggtttcccgtcgcccgattcc
tggttgccacaggaggatgcagtattatgtgctcttgtccatgaatatggcccaaattgg
agcctggtaagcgacgttatctatggaatgaccgctggtgggctttacagaggaagattt
cgccatccagttctgtgttgtgaaagatttagagaacttgttcaaaagtatgttcatgct
gtggccgacactccaaatagtgaaaaaccaagcacaaccgcccctacaaaagggccgctg
agagtcactgaggataatattcgagtcctattggatgctgcaatggagcaaccagatcgt
gagttacttcttcagagacactttactgccttgttgacttctgtttggaggatgacatcc
tcccttaaccagcaaaggaatcgttcaattacccctaaccacctttctccaagtataagg
ttgtttggtacatctgtcaacccgaatgcccaaactccagccattgggggatctaaaaag
agcttcaatcggagtcatgttaaactgattactacagcattgcacgatgctgaaaatttg
ggtccagacgggccggtttccaacctgatggaagaggatccgcctaccattgagaagttg
gatgtggtggtagaatttggaaaggaggaaagtgagatgggtgacttgaccgttggtttt
ccgtcgatggtatcattgtcaatatcaaatttagaggctttgtcgcctttgaagatagca
tctaaagaaaatcaacttaggttctcacaacagttggctgagagtcgtttgagagattcc
tcaactgcctgccttcatggtgtccttggctgggcatcgtctgtatttccaataatcgag
catcggtcacgctcatcattcaagtctccctcatcgggaaagcataagctgggtgttggt
gaatctagccgatcatcaaagtcaaaggtcagaaaacttatgggagaacaacccgatact
aatttagcattatccgacctatcacttcagttactgccttcgctttcagagaagaaccca
acttctacttctgggtcatatattacccaacctctcgatggctcttttgagaatttgtta
aatgatattccaattggccttgatgatacggacaatcctgaaatggtccctcattgctat
aatcccgattttctctccggccttgatgattgctctttgcttgaatctatggatattggg
taa
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