Silene latifolia (white campion): 141604752
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Entry
141604752 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141604752
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
141604752
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
141604752
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
141604752
NCBI-ProteinID:
XP_074279339
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Position
10:complement(3901592..3907433)
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AA seq
716 aa
AA seq
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MPQDKALPEPQGVRSLPKESLPPTPQDKALPEPQPKESLPPTTQDKALPEPQAVPPLPQE
PRAKPMTVEPKLPPSPPKESFPPVKLDIQDKFVILSNGLLAVTIANPDGFVTGINYNGID
NILDTVNPEDDRGYWDVVWAPPGTKGTKGNFQRIVAKEFRVILDRPDQIELSFKLPYNPS
TDAKKAAPMEIDQRYVMLQGVSGIYAYGIFERGGWDQFGMPNARLAFKLQRQMFKYMVVA
DNRQREMPVPEDRMKPRVQELEYPEAVIMINPLDPKLKGEVDDKYQYSKESQDIRVHGWI
CKDPPSGFWQITPSFEFRSGGPNKQFLTSHVGPSTLAMFVSAHYSGEELIPKFQQGEPWN
HIYGPIFMYMNNQTKGPDFKLLWEDAKQRMLAEVQKWPYSFPASEDFPKANERVNVTGRF
FVHDKYVTNTKVPAKNAFIGLGPVGEAGSWQRDCKTYQFWTRTDEEGFFTINYVRVGTYD
VHGFVDGYIGDFKHKTSVSISVGRNVDLGELVFEPLRDGPTLWEIGIPDRTAKEFYVPDP
NPKYVNKLYVNHPDKFRQYGLWERYGELYPKNDLVYDVHTSDYKKDWFYAQVTRQIGARY
NGTTWQVKFQLDDVAPNGIYKLRLALASATNSDLEVRFNQPKPSPAIFTSGRIGNDNSIA
RHGIHGLYWLFNIDVKGSTLVKGSNTMFLTQTKGASPFQGLMYDYIRLEGPASSPK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagataaggctttgccagagccacaaggagtacgctcgcttccaaaagagtca
ctaccaccaactccacaagataaggcattgccagagccacaaccaaaagagtcactacca
ccaactacacaagataaggcattgccagagccacaagcggtaccaccattgccacaagag
ccgcgagcaaagccaatgaccgtagaacctaaacttccaccctcacctccgaaagagtca
tttccacctgttaaacttgatatccaagacaagtttgtaattttgagtaatggattgctt
gcagttacgatagccaacccagatggattcgtaactgggattaactacaatggcatcgat
aacattttggacacggtcaatcctgaagacgatagaggttattgggatgtcgtttgggct
ccaccgggtaccaaaggaactaagggaaattttcaaaggattgtagctaaagagtttcga
gtaattttggatagaccggaccaaattgaattgtcatttaagttgccatataatccatct
accgatgctaaaaaggccgccccaatggaaatcgatcaaaggtacgtcatgcttcaagga
gtatcgggaatatatgcctatggtatattcgaaagagggggatgggatcaatttggcatg
ccaaatgctaggcttgcttttaagcttcaaagacaaatgtttaagtacatggtggtagca
gataatcgacaaagggaaatgccggtaccagaggaccgtatgaaacccagagttcaagag
ctcgaatatcccgaagctgttattatgatcaatccccttgatcccaaactcaaaggagag
gtggatgacaaataccaatactcgaaggaaagccaagacataagggtacatggatggatt
tgtaaagacccgcctagcggattctggcagattactccgagctttgagttccgttctggt
ggtccaaacaaacagttccttacttcccatgtcgggccgtccacccttgctatgtttgtg
agtgctcactactcaggagaagagcttatacctaaatttcaacaaggagaaccatggaat
catatctatggtcctattttcatgtacatgaataatcaaaccaaaggtccagattttaag
ttgctttgggaggatgctaaacaaaggatgttagcggaagttcaaaaatggccttatagc
tttccggcatcagaagattttccgaaggcaaacgaacgagttaatgtcactggtagattt
tttgtccatgataaatatgtcaccaatacaaaagtacccgccaaaaatgcattcattgga
ctaggcccagttggagaagctggatcttggcaaagagattgcaagacatatcaattttgg
acacgaacggacgaggaaggattctttacgattaactatgtacgagttggaacctatgac
gttcacggttttgttgatggttatatcggcgattttaaacacaaaacatctgtcagcatc
tctgtaggccgcaatgttgatttgggggagctcgtgttcgagccactaagagacggacca
accctttgggaaataggcattccggatcgtactgctaaggaattttatgttccggatcct
aatccgaagtatgtcaacaagctttacgtcaaccatcctgataaatttagacaatacgga
ttatgggagcgatatggcgaattatatcctaagaatgacctggtttacgatgttcataca
agcgattataagaaagattggttctacgctcaagtcaccaggcaaataggtgcaagatat
aatggaactacatggcaagtcaaatttcaacttgatgatgttgcaccaaatggaatctac
aagttaagattagcacttgcatccgcaaccaattccgatttagaggtacgattcaatcaa
ccaaagccaagtcctgcaatatttacatcaggaagaatagggaatgataattcgatagca
aggcacggtattcatggattatattggctctttaatatcgacgtaaaaggaagtactctg
gttaagggtagcaacaccatgtttctgactcaaactaagggggctagccctttccaagga
ctaatgtatgattatattcgactcgaaggccctgcaagcagtccgaaatga
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