Silene latifolia (white campion): 141604889
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Entry
141604889 CDS
T11116
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141604889
Enzymes [BR:
slaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
141604889
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
141604889
Prokaryotic type
141604889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
141604889
NCBI-ProteinID:
XP_074279543
LinkDB
All DBs
Position
10:complement(6615787..6620849)
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AA seq
510 aa
AA seq
DB search
MVASCWCVRIQWASVIGRPIRVLYPRNSRKFNRVFSHAASFPQTAETETVTVTETVSPKW
EAFRKKKVVMRVGYSGSNYKGLQKQREDNVRTIEEALEIALYKAGGIRESNYGKLEKIGW
GRSSRTDKGVHSLATTISLKLEIPDFAWMSDPNGLRLANIVNSHLPPDISVFTILPSQRS
FDPRRECHIRNYSYLLPAQIIGITPDSTPHEVDHHISDFNTILNSFEGSHPFHNYTARAN
YRRQTSKGQANRRKKQSNKLPPLEVDGNSADSQLVAATKAEALNNEELIDDLLDPSDSEE
VVNSEDVLEHNNAGNTKSTSAIYARWLHETDEADLLSSSHWRKIFQCSCGPLDQSLGMSF
VELSICGESFMLHQIRKMVGTAVAIKRDLLPRDILELSLNKFSRIILPLAPSEVLLLRGN
DFKLRKQPGNKKRPEMQILVDSEDINKAVDKFYRTILLPQISEFLDPSESPWKKWLETLD
ANVSMPDSQLAEVRNAWKAWNDERLRKMSE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtggcatcgtgttggtgtgtgcgaattcaatgggctagtgttattggcagaccaatc
agggtgttgtatccgaggaacagtcggaaatttaatagagtattctcccatgctgcttct
tttcctcaaactgctgaaactgaaactgtaactgtaactgaaactgtatctcccaaatgg
gaagccttccggaagaagaaagtagttatgcgggtggggtattctggttccaactacaaa
ggtttgcagaagcaacgagaggataacgttcggacaatcgaagaagctctggaaatagca
ctgtacaaggccggaggaatccgtgaaagcaactatgggaagctggagaagatagggtgg
ggtcggagtagtcgcactgacaaaggggtccactctctcgctaccactatctctctcaaa
ttggaaatccccgacttcgcttggatgtctgatcctaacggcctgcgccttgccaacatc
gtcaactctcatcttcctcctgatatttctgtcttcaccatcttaccctctcaaaggagc
ttcgatcccagaagggaatgccacattcgtaattactcttacctccttcccgcccaaatt
atcggcattactcccgattctacacctcatgaagttgatcatcatatttcagatttcaac
accattcttaactcttttgagggaagccaccccttccataattacacagctagagccaat
taccgtagacaaacatctaaagggcaagctaacagaagaaagaaacagtctaacaagttg
ccgcccttggaggttgacggtaatagtgctgattctcagcttgtggcggctactaaggct
gaggcattaaacaatgaagaattgattgatgaccttttagacccaagtgattcagaagaa
gtggttaactctgaggatgtacttgagcataataatgctggaaacaccaagtctacttct
gccatttatgcaagatggcttcatgagactgatgaggcagacttacttagctcgtcccac
tggaggaagatatttcagtgttcctgtggcccgttggatcaatctctaggaatgagtttt
gttgagctctccatatgtggagagtctttcatgcttcatcaaattcgaaaaatggtgggc
actgctgtcgcaataaaacgtgatttgcttcctagagacattctggagctgtcactcaat
aagttctcgaggatcatcctaccccttgctccatcagaagttttgctgttaagagggaat
gatttcaaattaagaaagcaacctggcaataagaaaagacctgagatgcaaattttagtt
gattccgaggacattaacaaagcagtagataagttctacagaacgatactactgcctcag
atttcagagttcctggacccttcggagtctccctggaaaaaatggcttgaaactctagat
gccaatgtaagcatgcctgattctcagttagctgaagtaaggaatgcatggaaggcatgg
aatgacgagcgtctccgaaagatgtccgagtga
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