Silene latifolia (white campion): 141604950
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Entry
141604950 CDS
T11116
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141604950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141604950
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
SR proteins
141604950
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
RRM_3
RRM_fung
RimM
DUF2129
Motif
Other DBs
NCBI-GeneID:
141604950
NCBI-ProteinID:
XP_074279646
LinkDB
All DBs
Position
10:8352346..8357798
Genome browser
AA seq
259 aa
AA seq
DB search
MRPVFVGNIGHDARQGELERLFSKYGTVDRVDIKTGYAFVYFEDERDAEDAVRCLDKYPF
GYDRRKLSVEWARGERGKARDAPKGASQRPTKSLFVINFDPIRTRVRDIERHFDPYGKVL
NVRVRRNFAFVQFETVEDATKALECTNMSKLLDRVISVEYALRDDDDRDDRDGSLGRGGY
GRSPYRRSPSPLYRHSRPSPDYGRGSRGRPSPDYGRPRSPVYDRYDGPAPAYDRQHSPVY
DRRRSPVYDRIRSRSPVRR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttcgtcggaaatatcgggcatgacgctcgtcaaggggagcttgaacga
ctcttctccaaatacggcactgttgaccgcgtcgacatcaaaactggctatgcttttgtg
tacttcgaagatgagcgtgatgctgaggatgctgttcgttgtcttgacaaatatccattt
ggttatgaccggcgcaagctgtccgtggagtgggccaggggtgaaaggggcaaggctcgt
gatgcaccaaagggagcaagtcaaagacctactaaatccttgtttgtgataaactttgat
ccgattagaacccgtgtgcgtgatattgagagacacttcgacccttatggaaaagttctc
aatgtccgagttagaaggaactttgcatttgtacagtttgagaccgtggaagatgcaact
aaagctcttgagtgtaccaatatgagcaagctgctagatagggtaatctcagttgaatat
gctctgcgtgatgatgatgatagagacgatagagatggtagtcttggaagaggtggttat
ggcaggagtccttacaggcgttcgccaagtccactttatcgtcatagcagaccaagtcct
gactatggtcgtggatctcgtggcaggccaagccctgactatggacgccctcgtagccct
gtctatgatcgatatgatggtccagcaccagcatatgaccgacagcacagtccggtttat
gatcggcggcgtagtccggtttatgaccgaatcagaagtcgatcgcctgtcaggagataa
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