Silene latifolia (white campion): 141605263
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Entry
141605263 CDS
T11116
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141605263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141605263
Enzymes [BR:
slaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
141605263
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
141605263
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
141605263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
ResIII
nSTAND3
DEAD
Dna2_Rift
DUF7372
PhoH
Motif
Other DBs
NCBI-GeneID:
141605263
NCBI-ProteinID:
XP_074280063
LinkDB
All DBs
Position
10:17497899..17509143
Genome browser
AA seq
1524 aa
AA seq
DB search
MPPKRKPKSSSTSKKSSQSNSSQHPPPTKYGIQHFFGRVSQNPAKKPNTGSNNSKQIENK
VGEECGGRRVVDGSEGDVGNPRNGPEPKKIKLTGNGSGSVLSEKGDVRNSRNGFDSNSAK
VGSELKKHKLIENGSDLIVGEKGDVGNPRNGPEPKKLKLTGNGSGLVLSEKGDVGNLRNG
VDSNSAKVGSELKKLKSIENGSDLIVSEKGDVGNHRNGVDFGEKVRKGGVSEQIRVSHDE
LGLSTRYGLDFGSDSTPVDQLLVDLTNSDEVDEVSPDVLKGGPKKRFKFSPGMIIKLSQD
DGGDEVTWKISPVNERLRSLSKLAPDVVKALADASRLNSCSFQQLSDDKSLKADEASSVN
RLDAHEKSLLPNGGASKDKSRGQNIDVNGRGDDANEFNNSAATSTQSPFRTPPSLSYRLD
KPTGSSNHKTGLRECTGLRQHKKALLELLDQVETAITVEGTPSVGPLQSLKVCTRTKGGN
SANVNDALKEEAVRGQKEVEVGPSDPCFLVLEVTEKRATPTSDGAQCSVKVLRVLSEHSG
EEHCVHLWDDWLYSVIEPGDTIRVIGEFDDQGNCDVNHEKNLLIVHPNLLLSGTRIAGSF
SCSRRAVLDERLKCSEHSTAALIGTILHQIYQAGLIMEHPTIERLLEFSKVVMQKNIESL
YACGVQEKDVWVTLNEAIPKICNWIGLFMKSQKFNAPTVDFGPSNGLVKVNISDVVDIEE
MVWAPKYGLKGMIDASVRVKNFSNGNHIDEKMMPLEFKTGKATSGQSLMEHTAQLILYIL
LMSERYSQSIDSGLLYYLSTNLTMGINCRRSDLIGIIMRRNELAHDITKASIAQQLPQML
KTLNMCKGCRHLNSCTIYHKMHGGNAESSGLGDLFDSLTAHLTTSHKLFFNQWNRLVDLE
ANEQQFSNNLTWRSRVSSQESVSSCLSSIILDGSDEQHMLTSTKDVRFVYRFIHKDTPFP
GDRAHNQASTDGSFSSENDLQCSLRSGDRVILSTESNCLAVASATIIDISRSHVSLAFSK
RLRLPRSTRSSLSQDLQNEVWRIDKDEVASSFGTMRFNLVQLFFQNAQSESLRKLIVDLE
APRFDSGSILSQDPAISYIWSERNLNVDQQRAIIKILTAKDYALVLGMPGTGKTSTMVYA
VKALLMRGASVLLTSYTNSAVDNLLIKLKSQGIDFVRVGRREAVHKEVEGHCLSDMDIQS
VEDIKLKLDEIKVVAVTCLGITSPLLANKRFDVCIIDEAGQTSLPVSLGPLMFCSKFVLV
GDHYQLPPLVKSPEARESGMSVSLFRRLSEAHPQAISALRSQYRMCAGIMKLSNALIYGD
RLRCGSLDVENAKLKLLKRGSISPWLEEVLDANKPVIFINTDKLPALETRDQKTVNNPVE
AHIVAEMTEALANQGVEKEEIGIITPYNSQANLIRQVLNFTAVEVHTIDKYQGRDKDCIL
VSFVRSTQNPRNCSSSLLGDWHRINVALTRAKKKLVMVGSCKTLSRVPLLKLLIEKVDEQ
SGIFCITRKDIEYKTELKRCSRLE
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaaggaaacctaaatcatcatcaacttcaaagaaatcctctcaatccaac
tcatctcaacaccctcctccgaccaagtatggcatccagcacttcttcggccgcgtttcc
caaaacccggctaaaaaacccaataccggatcgaacaactcgaaacaaattgaaaataag
gtgggtgaggagtgtgggggcagaagggttgttgatggtagtgagggtgatgtgggaaac
cctagaaatggtccggaacccaagaagatcaagttaactggaaacgggtcgggttcggtt
ttgagtgagaagggtgatgtgcgaaactctagaaatgggtttgattccaattcggcaaaa
gtgggttctgaattgaagaagcataaattgattgaaaacgggtcggatttgattgtgggt
gagaagggtgacgtgggaaaccctagaaatggtccggaacccaagaagctgaaattaacc
ggaaacgggtcgggtttggttttgagtgagaagggtgatgtgggaaatcttagaaatggg
gttgactcgaattcggcaaaagtgggttctgaattgaagaagcttaaatcgattgaaaat
gggtcggatttgatagtgagtgagaagggtgatgtgggaaatcatagaaatggggttgat
tttggggaaaaggtgagaaaaggcggtgtttcggagcaaattagggtttctcatgatgaa
ttggggttaagcactaggtatggattggattttgggtctgatagtactccggtggatcag
ttgttggtggatcttactaattctgatgaggtagacgaggtttcgccggatgttttgaag
ggtgggcctaagaaacgcttcaagttctctcctggcatgataataaagcttagtcaagat
gatggtggggacgaggtgacatggaagatttcacctgtcaacgagcgccttcgatccctt
tcaaagcttgctcctgatgtggtgaaggcgttagctgatgcttctcggctcaattcttgc
agtttccagcaattatcagatgataaaagtttgaaggctgatgaagctagttctgtaaat
aggctggatgctcatgaaaagtccttgttacccaatgggggtgcctcaaaggacaagagt
agaggccaaaacattgacgtaaatggcagaggtgacgatgccaacgagttcaataattca
gctgctacaagtacacagagcccttttagaactccaccatcactgtcgtatcgccttgac
aagcctactgggagttctaatcacaagacaggtctacgagaatgtacgggattaagacaa
cacaaaaaagctcttcttgaacttctagatcaagtggaaactgcaattaccgttgaaggg
acaccatctgttggacccctgcagtcacttaaagtttgcacccgaaccaaaggtggaaat
tctgctaatgttaacgatgccctaaaggaagaagcagttaggggacaaaaagaggttgaa
gtcggaccatctgatccttgttttcttgtcttagaggtcacagagaagcgtgcgacgccc
acttcagatggagctcagtgctcagtgaaggttctgcgtgtgttatctgagcatagcggt
gaggaacattgtgtacatctgtgggatgactggctttatagtgtaattgagcctggagac
acaattagagttattggtgaatttgatgatcagggaaactgtgacgtgaatcatgagaaa
aatcttctgattgtacatccaaacctgctactttcaggcactcggattgctggtagtttc
agctgttcaagacgagctgttttggatgagaggttgaaatgcagtgaacattcaactgca
gcattaattggcacgatattgcaccaaatttatcaggctgggctgataatggaacaccct
actatagagcggcttttagaattttctaaggttgtgatgcagaaaaacattgaaagcttg
tatgcatgtggagtgcaggaaaaagatgtgtgggtgacgttgaatgaggcaatcccaaaa
atatgcaattggataggactcttcatgaaatcacagaaattcaatgcaccaactgttgat
tttggacccagtaacggacttgtaaaagtgaatatatctgatgtagttgatatagaggaa
atggtatgggcaccaaaatatggcttaaaaggaatgattgatgcttctgttcgagtaaaa
aatttctccaatggcaaccatattgatgaaaagatgatgcccctagagttcaaaactggt
aaagcaaccagtggtcagtccctgatggaacacacagcccagctgatcctgtacattctt
ctcatgtctgagagatattcacagagcattgattctggactcctgtattacctttcgaca
aatttgacaatgggaataaattgtcggagatcagatttgattggaattatcatgcgccgt
aatgaactagcacacgatatcacgaaggcctcaatagcccagcaactgccacaaatgctc
aagacattgaacatgtgtaaaggctgtcgtcatctcaattcttgtaccatttatcacaag
atgcacgggggtaatgctgagagtagtggattgggagacctttttgattcactgactgcc
catctaacaacctctcataaacttttctttaatcagtggaatcgtttagtcgaccttgaa
gctaacgagcagcagttttcaaataatttgacctggagatctcgtgtgtcaagtcaagaa
agtgtctcaagttgcctctcttctattattctcgatggatcagatgagcaacatatgctg
acatccacgaaggatgtccgctttgtgtatcgcttcattcataaggatactccctttcct
ggcgaccgagcgcacaatcaagcttctacagatgggtcattttcttcagagaatgatttg
cagtgcagtcttcgcagtggtgatcgtgtgatcttgagcactgaatcaaattgtcttgca
gttgcgagtgcgaccatcatagatatcagtcgctctcatgtttcactggcattttcaaag
cgcttgaggcttccaaggagcactcgttcatcattgtcacaggatcttcaaaatgaggtg
tggcgaatagacaaggatgaagttgcatcgtcttttggtacaatgaggtttaatttggtt
cagctatttttccaaaatgcacaaagtgaaagcttgagaaagctaattgtggatcttgag
gctcccagatttgacagcgggtcaatactcagtcaagacccagcaatatcttatatttgg
tctgagaggaacttaaatgttgatcagcaaagggcaatcattaagattctcactgcaaaa
gactacgctcttgttttgggaatgcctgggactggcaagacatccacaatggtatatgct
gtgaaggctttgttgatgaggggtgcatcagtcttgcttacatcatacacaaattcagct
gttgataacttgcttatcaaattgaaatcccaggggatagatttcgtacgtgttggtcga
cgtgaggcagtgcacaaagaagttgagggccattgtctttcagatatggacattcagagt
gtagaagacatcaaactgaagttggatgaaatcaaggttgttgcagttacatgtctggga
ataactagccccttgcttgcaaataagagatttgatgtgtgcataattgatgaggctgga
cagactagcctgccggtgtctttagggccattgatgttttgttccaagtttgtcctcgtc
ggagaccactatcaactaccacctcttgttaagagtccagaggctcgagaaagtggaatg
tctgtaagcttatttcgcaggctatcagaagcacatccccaagcaatatcagctctgcga
agtcagtaccggatgtgtgcgggaatcatgaaactctcgaatgcccttatatatggcgac
agactgcgatgtggctctttagatgtagagaatgcaaaacttaaattattgaaaagagga
tccatatcgccatggttggaggaggttttggacgcgaacaagccagtaatatttattaac
acagataaattgcctgccttagagacgagggatcagaagactgtcaataacccagttgaa
gctcatattgtggccgagatgactgaagcattagctaaccaaggggttgaaaaggaggaa
attggaattattactccatacaattcccaggcgaatctcatccggcaagttcttaacttc
acagctgttgaggtccatactattgataaataccaggggagggataaagactgtatacta
gtttcatttgttagatctactcaaaatccaaggaattgctcatcttctttacttggtgac
tggcatcgaatcaatgtggctttaacacgtgcaaagaaaaagttagtaatggtaggctca
tgcaaaactctgtcaagagttccactgctaaagcttctgattgagaaagtagatgagcaa
tctggaatattttgcattactaggaaggatatcgagtacaagacagagctaaagagatgt
tcccggcttgagtga
DBGET
integrated database retrieval system
