Silene latifolia (white campion): 141605304
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Entry
141605304 CDS
T11116
Name
(RefSeq) putative galacturan 1,4-alpha-galacturonidase SALK6
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141605304
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
141605304
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF3852
Motif
Other DBs
NCBI-GeneID:
141605304
NCBI-ProteinID:
XP_074280113
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Position
10:18896336..18899017
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AA seq
397 aa
AA seq
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MSIFNLPLFVSLLYLFVSVAICQTVFDITKYGAKPNGDATQGMIGAWKAACASKAPSKII
VPKGQYTLNAVKLVGPCKGQITMEIAGNFKAPANPAQMKGADTWVKIEHVDNLIVTGLKG
GGSFDGQGQMAWKQNNCAQTGTCNSLPYNFRFQFMNDCKISGIKSINSKLYHMGVLGCKG
LTLYDTTIQAPKESLNTDGIHIGRSERVNITKANIGTGDDCISMGDGAKDIHIQSVTCGP
GHGISIGSLGRYPNEAPVTGVTIKGCIISNTDNGIRIKSWLNSYPAIASNMHFEDVTVNN
VLTPILVDQEYCPYNHCKAKTPSKVKLSDISFKNFRGTAGSKEAVKLICSSGSPCQKVQL
TDIDLTFKGGPAVSMCKNVKPIVTGKNNPKACGAPAA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctatattcaatctcccattatttgtgtctttactttatttattcgtttcggttgcc
atatgtcagaccgtttttgacataaccaaatacggtgctaagcctaatggtgatgcaaca
cagggtatgataggtgcatggaaggcagcatgcgcatctaaagctccatcaaagataata
gtaccaaaagggcaatacacgttgaatgcagtgaagcttgtaggtccatgcaaaggccaa
attacaatggaaattgcgggaaattttaaggccccagcaaaccctgcgcaaatgaaaggt
gcagacacttgggttaaaattgagcatgttgacaatcttatagtaaccgggcttaagggt
ggaggttctttcgatggtcaaggtcaaatggcatggaagcaaaacaattgtgctcaaact
ggcacatgcaatagccttccttacaattttaggttccagttcatgaacgattgtaaaatt
agcggaataaaatcaatcaacagtaaattgtatcacatgggagtattggggtgcaaaggt
ttaacactatatgacactacaattcaagcaccaaaagaaagtcttaacacagatggtatc
catataggaagatcggaaagggtgaatataaccaaggccaacatcggtaccggggatgat
tgtatatccatgggtgatggggcaaaagatattcacatccaatcggtcacttgtgggccc
ggccacgggattagcattggaagtctcggtaggtaccctaatgaggcccccgtaactgga
gtcacgatcaaaggttgtattatcagcaacacagataatggtattaggatcaagtcatgg
ctcaattcttatcccgctatcgcatctaacatgcactttgaggatgtcacggttaataat
gtgctcacccctattcttgttgatcaagagtattgcccttacaaccattgcaaagctaag
acaccatcaaaggttaaattaagtgacataagcttcaaaaacttcagaggaacagcagga
tcaaaagaggctgtcaaactaatatgtagcagtggatctccatgtcaaaaggtgcaactg
acagacattgacttgacttttaaaggtggaccggctgtgtcaatgtgtaagaatgttaag
cccattgttacaggaaagaataaccctaaggcttgtggtgcaccagctgcttag
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