Silene latifolia (white campion): 141605325
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Entry
141605325 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141605325
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141605325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141605325
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
SR proteins
141605325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
141605325
NCBI-ProteinID:
XP_074280138
LinkDB
All DBs
Position
10:complement(20413962..20418844)
Genome browser
AA seq
253 aa
AA seq
DB search
MSHFGRTGPPDISDTYSLLVLNITFRTSADDLYPLFDRYGKVVDVFIPRDRRTGESRGFA
FVRYKYQDEAAKAVEKLDGKVVDGREIMVQFAKYGPNAEKIQKGRVSEPVTSKGRSRSPR
PRYRDDHREKDYRRRSRSRSRDRHDRDRYRERDRGHRRRSRSYSRSPGYRKDNGKGKYDD
ERRSRSRSRPQGSASPRRSSLSPRRSPSPKRSPRVESPAARVREEQSPIPRNGSRERRAD
SRSQSPRKFDVDE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaagaacaggtcctcctgacatcagtgacacttactccctcctcgtt
ctcaacatcaccttccgcacttcagctgatgatttgtacccgcttttcgaccgttacggc
aaggttgttgacgtcttcattccccgtgatcgcaggactggtgaatcgcggggttttgct
tttgttcgctacaagtatcaggatgaagcagccaaggctgttgaaaaacttgatgggaaa
gttgttgacgggagagaaatcatggtccagtttgccaagtatggtcctaatgctgaaaaa
atccaaaagggaagggtaagtgaaccagttacttcaaaaggaagatcaagaagccctcgt
ccaaggtaccgagatgaccatagagaaaaagattatagaaggagaagccgtagtagaagc
agagataggcacgatagggataggtaccgtgagagggacagaggtcaccgtcgtcgaagc
aggagctacagtagaagcccaggctaccgcaaagataatggtaaaggaaagtatgatgat
gaaaggcggagccgaagtcggagtcgtcctcagggaagtgcttctcctcgtagatccagc
ctcagtccaaggagaagcccatcacctaagcgatctccaagggttgaaagtccagctgca
cgtgtgcgagaagagcaatctccaatcccaaggaatggttctcgtgagcgtcgtgctgat
tctcgtagccagtctccccgcaaatttgatgtggatgagtga
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