Silene latifolia (white campion): 141605356
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Entry
141605356 CDS
T11116
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141605356
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP100
141605356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
MCM
RuvB_N
Mg_chelatase
Sigma54_activat
AAA_14
IstB_IS21
Sigma54_activ_2
AAA_28
ABC_tran
AAA_16
nSTAND3
AAA_7
AAA_18
DEAD
TsaE
T2SSE
PduV-EutP
ResIII
FoP_duplication
PhoH
NACHT
AAA_23
RNA_helicase
AAA_25
AAA_15
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
141605356
NCBI-ProteinID:
XP_074280179
LinkDB
All DBs
Position
10:22404681..22414747
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AA seq
654 aa
AA seq
DB search
MSSIFRWKRLAVAAVKATRRSVICAGHRRVALASPPPVFSQERCKWGGGAGNNDGNYRRQ
IRAEVNCPRCSRHMDVLFTNGNGNNSNNVDVQAVSVCPTCRSAFYFYPYKVAPLQGSFVE
IASNSNNDDAKDKSDIFDNDEKIKDIEESNNRIPPQFWDVLKNSYIVGGAGGGDGGGETP
ENGMTVHRPPMPPFMPGVHYARGAGYGGRRGGKGGGKRGGGSNKAEKSDRWGGANLGKDL
PTPKEISKGLDKFVIGQHNAKKVLSVAVHNHYKRIYHASLKGSEAQLPATDIENDDVELE
KSNVILMGPTGSGKTLLAKALARFVNVPFVVADATTLTQAGYVGEDVESILQKLLLAADF
NVQAAQQGIVYIDEIDKITKKAETMNVSRDVSGEGVQQALLKILEGTIVNVPEKGGRKPP
RGDHIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANLRAGGSSSAVVASTL
LESVESSDLIAYGLIPEFVGRFPILVSLLALSEDQLVQVLMEPKNALGKQYKKLFSMNNV
KLHFTENALRLIAKKSMVKNTGARGLRALLENILTEAMYEIPDVKMGSDYIDAVVVDEEA
VGPINSPGCGAKILRGDGALEKYLAGSDHEEDAFSLATEFERSRKGIFTRGVTA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcatttttcgatggaagagactcgccgtcgctgccgtcaaggccacgcgccgc
tccgtcatctgcgccggtcaccgccgcgttgctctagcctcgccgccgccggttttcagc
caggaacgctgtaagtggggcggcggagctggtaacaatgacggtaattatcgtcgtcaa
attagagctgaggttaattgtcctaggtgttctagacatatggatgtgctttttaccaat
ggtaacggtaataatagtaataatgtagatgttcaggcggttagtgtgtgtcctacttgt
agatcagctttttacttttatccttataaagttgctcctcttcaaggtagttttgtcgaa
atcgcgagcaatagtaacaatgatgatgctaaggataagagtgacatttttgataatgat
gaaaaaattaaggatattgaagagagtaataataggattccgccacaattttgggatgtg
ttgaagaattcatacattgttggtggagctggaggtggagatggtggtggggagactccg
gagaatggaatgacggtgcataggccgccaatgccgccgtttatgcctggggtgcattat
gctaggggtgctgggtatggtggtcggcgtggtggtaagggtggagggaagcgtggtggt
gggagtaataaggcagagaagagtgatagatggggaggtgctaacttagggaaggattta
ccgacacctaaggagatttctaaggggttggataagtttgttattggtcaacataatgct
aagaaggtcctttctgttgcggtacataaccattataagaggatatatcatgcttcattg
aaaggatcagaagctcaattgcctgctaccgacattgagaatgatgacgtcgaattggaa
aagagcaatgtcatattgatgggtccaactggttctgggaagacattacttgcaaaagca
cttgctcgttttgtgaatgtacctttcgtggttgcggatgcaacaaccttaacacaggct
gggtacgttggagaagatgttgagtcaatattacagaagttactcttggctgcagacttc
aatgttcaagcagcacagcaaggaattgtctacattgatgaaatcgataagataactaaa
aaggctgagaccatgaatgttagcagagacgtctctggtgaaggtgtgcagcaggctttg
ttgaaaatacttgaaggaactattgtgaatgtccctgaaaagggagggagaaagcctcct
cgcggagaccatattcagattgatacaaaagatattctatttatctgtggtggtgctttt
gtggatttggagaaaacaatttcagaaagacgacaagattcgtcgattggttttggagca
cctgtacgagcaaacttgcgagctggtgggtcaagtagtgctgtggtggcatcaacatta
cttgaatctgtagaaagcagtgatcttattgcatacgggcttattccagaatttgtcggc
cgtttccctattctggtcagtctgttggcattgtctgaggaccagcttgttcaggtcctc
atggagccaaagaatgctcttggaaagcagtacaagaaattgttcagcatgaacaatgtg
aaacttcactttacggagaacgctttgaggctgatagccaagaaatctatggtcaagaac
accggtgctagaggtttacgagcccttttggagaacatacttacggaggcaatgtatgag
ataccagatgtcaagatgggaagtgactacatagatgcagttgtggtggacgaggaggcc
gtgggtcccattaattctcctggatgtggggccaaaattcttcgtggagatggtgcactt
gaaaagtacctggctggttcagaccatgaagaagatgccttttcattggctacagagttt
gaaaggtcgcgaaaagggatttttacaagaggtgtgaccgcatga
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