Silene latifolia (white campion): 141605411
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Entry
141605411 CDS
T11116
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141605411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141605411
Membrane trafficking [BR:
slaf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
141605411
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
141605411
NCBI-ProteinID:
XP_074280252
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Position
10:26893368..26901778
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AA seq
581 aa
AA seq
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MVLVTAVRDYINNMLQQISGMKILILDSHTVSVVSVVYSQSDLLKKEVFLVEMIDSISMS
KESLLHLKAVCFLRPTSENVQHLRRQLTSPRFGEYHLFFSNILKDSQIQMLADTDEHEIV
QQVQELYADFVSVDCCHFSLNIPSNHLYMVPVGIKCRGVPALERSSLQHYYDLVVERIST
VFLALKGRPFIRYQQTSDIAKLIAQSTAKFMCEQESGLFDFKRTDTLLLVLDRRGDPFTP
LLNQWSYQAMVHELIGIEDNKVDLRNVGNFPKDQQEVVLSSEQDAFFKANMYENFGDIGI
NLKEMVDKFQQTANSNLSIQTIEELAGFVDNYPEFRRMHCNVSKHVTLVTEMSKIVEDRK
LMLVSQTEQELACNEGKAAAFEALTNLINNDNVSDIDQLRSLMLYALRYEKEYPSGELIQ
LSHKLYSNTKKHKGGVMPLGYVHILVRQACVHDHTWDLFRSRDLTNIVHNMASGLKGVEN
VYTQHQPLLYKTMESISEGQLNDADYPVEGNHFQQGRPQDVVIFIVGGTTYAESRAVALF
NSNNSGIHFILGGTTILNSERFLKDVEDAGGLMRASIHCGY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtcactgctgttcgtgattacatcaataatatgctccaacaaatttccggc
atgaaaatcctcattctcgattctcacactgttagtgttgtaagtgtggtctatagtcag
tcagatctactaaagaaggaagtgtttctggtagagatgatagactccatatccatgtca
aaggaatccctgttgcatcttaaagctgtttgctttcttagacctacgtcagaaaatgtt
caacatttgaggcgtcagcttactagtccaagattcggggagtatcatctttttttttcc
aacatattgaaggattcacagattcagatgttagcagatacagatgaacacgaaattgtg
cagcaagttcaggaactttatgctgactttgtttctgttgactgttgccattttagtctt
aacattccttcaaatcacctttatatggttccggtagggattaaatgtcgaggggtgccg
gccttggaacgttcaagtctgcagcactactatgatctagttgttgagagaatttcaaca
gtttttttggcacttaaaggacggccctttatcagataccaacaaacatcggatattgca
aaattaattgcacagagtactgcgaaatttatgtgtgagcaagagagtggccttttcgat
tttaagaggacagatacattgttgctcgtcttggacagaaggggtgatccatttactcct
ttgctaaatcagtggtcgtatcaggcaatggttcatgaattgataggaatcgaagataac
aaagttgatttgaggaatgttggaaattttcccaaggatcagcaagaggttgtgctgtct
tctgagcaagatgcttttttcaaagcgaacatgtatgagaacttcggagacattggaata
aatctcaaagaaatggtggataaatttcagcaaactgcaaacagtaatctaagtatccaa
acaattgaggagttggccggatttgttgataactaccctgagttcagaagaatgcattgt
aatgtctcaaagcatgtgacattggtgacggaaatgagcaagatagtcgaggacagaaag
cttatgttagtttcacaaaccgaacaagagttggcttgcaatgagggcaaggctgcagca
tttgaggctctgacaaatcttataaacaatgacaatgtgtctgatattgatcaattaaga
tcgcttatgttgtatgctttgcgctatgagaaggaatatccttcaggggaattaatacaa
ctctcccacaagctgtactcaaatacgaagaagcacaagggtggagtaatgccgctaggg
tacgtgcatattcttgtgagacaggcatgtgttcatgatcatacctgggatttatttcga
agccgagatctcaccaacattgttcataacatggctagtggattgaagggagttgaaaat
gtgtatacccaacaccagcctcttctatataagactatggaaagcatttccgaggggcag
ttgaatgatgctgattacccagtcgaagggaatcattttcagcagggcagaccacaagat
gttgtcatttttatcgttggtgggacaacgtatgcggaatcacgtgctgttgctctgttt
aattccaataactctgggattcattttattctaggaggcacgacgattctcaattctgag
aggttcttgaaggacgtggaagatgctgggggactaatgcgggcaagcattcattgtggt
tattga
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