Silene latifolia (white campion): 141605517
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Entry
141605517 CDS
T11116
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141605517
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
141605517
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
DUF3619
RRT14
Motif
Other DBs
NCBI-GeneID:
141605517
NCBI-ProteinID:
XP_074280434
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Position
1:53338082..53347211
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AA seq
872 aa
AA seq
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MTSIMHPSQPLSSDTSDYDSDNTTNTTRRHVDLSNTIFKAYLEIHAHDSSTSSPHDLSKI
QSFLNSSTSGALSCLICLERIKPVDPTWSCGGSCFAVFHLHCIQSWAQQSTSLAASRALT
RLPISAEVAADTSVWNCPKCRFEYPKCEIPKIYTCFCGKVDNPIHDPWVLPHSCGEICGR
PLKNNCGHYCLLLCHPGPCPSCPKLVKCRCFCGGFEDVRRCGFKEYSCGNKCNKVLDCGI
HRCSEICHDGVCPPCREKGVYKCQCGRVKEDRECCDRVFRCENPCGRSLECGKHVCERGC
HGGDCGQCPFQGKRTCPCGKRVYEGMSCDAEVPLCGSTCDKKLSCGIHRCPDRCHRRACE
ETCRVVITKSCRCGGLKKQIPCHQDLVCERKCTRERDCGRHACRRRCCNGDCPQCAEVCD
RKLRCRNHKCPSPCHRGPCAPCPLMVTISCACGSTHFEVPCGTEKEQKPPRCRKLCQINP
LCRHSTTCKPHKCHYGACPPCKLPCGEEYPCGHACKLRCHGPRPPPNLEFTLKPKKKKQN
YQTEPTAGIPCPPCPELVWRSCVGQHFAAEKMMICSDNSQYSCDNLCGNPLACGNHYCTK
TCHALQHLSSSSDQRKRGEPCEECTLSCQKERSPPCQHPCPRRCHPGDCPPCKVLLKRAC
HCGAMVHVFECIYYNTLSEKEQLRVRSCGGPCHRKLPMCTHLCPEICHSGLCPSPEKCSK
KVTVRCACHNLKKEWLCQDVQIAYTNSGRDSKDIPKTQYGLRLLPCDSSCKSKAQAIESE
LQLRKPKAVEKKETESVTHVPKRRKRREQAQETRQVSKLQKFIKSLQRFVLLVVLLVLLV
AVAYFGYKGLLLLNDWMNEVEERRAKGKYRRV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgatcatgcacccttcacaacccctctcctcagacacctcagattacgattcc
gacaacaccaccaacaccacgcgccgccacgtggacctatcaaacaccatcttcaaagca
taccttgagatccacgctcatgattcatccacgtcatcaccccatgatctctctaagatc
caatctttcctcaattcttcaacttccggagcactctcttgcctcatttgccttgaacgc
atcaaaccagtggaccccacttggtcctgtggtgggtcctgttttgctgtcttccatctt
cattgcattcaaagttgggctcaacaatcaacctcattggctgcctcacgcgccctcacg
cgccttcctatatcggctgaggttgcggccgatacctcggtatggaactgtcctaagtgt
agatttgagtacccaaaatgtgaaattcctaaaatttatacttgtttttgtggtaaagta
gataacccaattcatgatccttgggttttgccccattcgtgtggggagatatgtggtagg
ccattgaagaataattgtgggcattattgtcttttgttatgtcaccctggcccttgcccc
tcatgccctaaattggtgaaatgtaggtgtttttgcggcggttttgaggatgttagaagg
tgtgggtttaaggagtattcatgtggtaacaagtgtaataaggttttggattgtgggatt
cataggtgtagtgagatttgccatgatggggtttgtccgccttgtagagagaagggtgtg
tataagtgtcaatgtgggagggtgaaggaggatagggaatgttgtgatcgggtttttagg
tgtgagaatccgtgtggtcgtagtttggagtgtgggaagcacgtttgtgagcgaggttgc
catgggggtgattgtggtcaatgtccgtttcaagggaagagaacttgtccgtgtggaaag
agggtttatgaggggatgtcttgtgatgctgaggtgcccttgtgcgggtcgacttgtgat
aagaagttgagttgtggaatacataggtgcccggatagatgccatcgtagggcttgtgaa
gagacttgtagggttgtgatcacaaaatcttgtcgatgtgggggtttgaagaaacagatt
ccctgccatcaagatttggtatgtgaaaggaagtgcacgagggaacgtgattgtgggcgt
catgcttgcaggagacgctgctgtaatggagactgtccacaatgtgcagaggtgtgtgac
cggaagctacgctgtaggaatcacaagtgtccttctccgtgtcatagaggtccctgtgca
ccttgccctctcatggtgacgatttcatgtgcttgcggttcaactcattttgaggttcct
tgtggtacagaaaaggaacagaagccacctcgttgtcgtaaactatgtcagataaatcct
ttatgtagacacagcacaacttgtaagccacataaatgtcattatggagcctgcccacct
tgcaaacttccttgtggagaggagtatccatgtggtcatgcctgtaaactaaggtgtcat
ggtcctcggccccctcctaacctagagttcactctgaagccaaagaaaaagaaacagaac
tatcagactgaaccaacagctggaataccatgtccaccatgtcctgagcttgtttggaga
tcctgtgttgggcaacactttgctgcagaaaaaatgatgatatgttcagataattcacaa
tattcttgtgacaacttgtgtgggaatcctcttgcttgtggcaatcattattgcaccaag
acttgccatgcacttcagcatttatcatcctcatcagatcaacgtaaaagaggcgagcct
tgtgaagagtgtactctttcctgtcaaaaggaaaggtctcctccatgtcaacatccttgc
ccacggcggtgccaccctggagactgccctccttgcaaagttctcttaaagcgtgcatgt
cattgtggtgcaatggttcatgtctttgaatgtatatactacaacaccttatctgaaaag
gaacaactgagagtccgttcttgtggtggaccttgccatcgaaagttacctatgtgcaca
catttatgcccagagatttgtcattcgggtctttgtccttcaccagaaaaatgcagtaaa
aaggtcactgttcgttgtgcgtgccataacttgaaaaaggagtggctatgccaagatgtg
cagatagcatatacaaattctgggcgtgattcgaaagatatacctaaaacccaatatggt
cttagacttctcccgtgtgattccagttgtaaaagtaaagcccaggccattgagtctgaa
ttacagcttcgaaaacccaaagcagtagagaagaaggaaactgagagcgtaacccatgtc
cctaagcgaagaaaaaggcgtgaacaagcacaagaaacgagacaggtttcaaaactgcag
aaattcatcaagagcctgcaaaggtttgttcttctcgtcgttcttctggtattgctggtc
gctgtagcatacttcggttacaagggcttgctgttgctcaatgactggatgaatgaagtt
gaagaacgaagagcgaaaggcaagtaccgaagggtctaa
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