Silene latifolia (white campion): 141605565
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Entry
141605565 CDS
T11116
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141605565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141605565
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
141605565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
AAA_29
AAA_16
AAA
ABC_trans_N
AAA_18
AAA_22
nSTAND3
RsgA_GTPase
AAA_33
AAA_30
AAA_23
NACHT
nSTAND_NTPase5
AAA_28
RNA_helicase
TIP49
NTPase_1
AAA_24
cobW
DO-GTPase2
AAA_11
AAA_5
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
141605565
NCBI-ProteinID:
XP_074280493
LinkDB
All DBs
Position
10:complement(44046406..44057859)
Genome browser
AA seq
1437 aa
AA seq
DB search
METSTADLYRVASVRLGGGSSWRNSGRDVFSVSVHDEDDEEALKWAALEKLPTYNRVRKA
IFNDMGGPAREIDVDKLGFDEKKEILERLVRIAEEDNERFLLRLRERIDRVGIDIPTIEV
RYENLNIGAQVLVGSKGLPSVFNFFTNTIEGLLNLLHILPNKRKPFAILHDVSGIIKPGR
MTLLLGPPGSGKTTLLLALAGKLAKDLEFSGRVTYNGHTMDEFVPQRTSAYISQHDLHIG
EMTVRETLAFSARVQGVGTSYDMLVELSRREKAANIKPDPDIDIYMKAAAVEGQETSVVT
DYILKILGLDVCADTLVGNEMIRGISGGQRKRLTTGEMLVGPAKALFMDEISTGLDSSTT
YQIVNSIRQSIHILKGTAVISLLQPAPETYDLFDDIILLSDGQVVYQGPREHVLEFFEFM
GFKCPQRKGVADFLQEVTSRKDQEQYWARRDAPYTFVTVKQFVEAFKRFHVGRRRAQELA
VPYDKSKSHPAALTTEEFGLNKKELLKACLSREALLMKRNSFIYVFKSVQLVITALITAT
LFLRTHMHKNSVQDGMVYLGALFFSQVQILFNGFSELSLTIIKLPVFYKQRDLRFYPSWA
YSLPSWLLKIPISIVETAIWVIITYYVMGYDSNVGRFFKQYLVLLGIHQMASALFRFNAG
IGRNMILANTFGTGALVTLLVLGGFILSRETVKKWWIWGYWISPLMYGQTALSVNEFLGH
SWTNNGLGKTVLDARGIFAHAYWYWIGLGALVGYVILFNVMYTIALTYLNPIGKPQPILS
EEDLQEKQANLTGQAIELSSRGRRSSGSGRGGEIQEESQRNGQRGMVLPFQPLAITFDEI
RYSVDMPMEMRSQVNEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY
IDGDIKISGYEKKQETFARVSGYCEQADIHSPHLTVHESLVFSAWLRLSSDVDAEARKTF
VEEVMELVELDSLRYALIGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA
AAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKRGGTQIYFGPIGRHGCDLIK
YFEGIRGVHKIKDGYNPATWMLEVTSMAQETQLGVDFSELYKNSDLYRRNKATIQQHSIP
APGSKDLYFPTQYSQPVLTQFMACLWKQHCSYWRNTMYTAMRLFFAIFVGVMFGSIFWKL
GSTTNKQQALLNAMGSMYTAVLFLGIQNSSGVQPVVFVERTVFYRERAAGMYSALPYAFS
QVLIEMPYCFFQTAFYGITVYAMMGFQWTAAKFLYYLYFMYFTLLYFTYYGMMSVGVTPN
PSIAAIVSSAFYGIWQVFSGFLIPRPRMPVWWRWYYWLCPISWSLYGLLVSQFGDLEITV
IDLEGDLKGLNVKQYLHAYFGYERDFLGPVAGVIVGINVLFAFVFAFAIKTFNFQRR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagtacagcagatttgtatagagtagcaagtgtgagattaggaggaggatca
tcatggagaaatagtggaagagatgtattctcagtatcagtacatgatgaagatgatgaa
gaagcacttaaatgggctgctcttgagaaattaccaacttataatcgagttaggaaagct
atttttaatgatatgggtggtcctgctagagaaattgatgttgataaacttggttttgat
gaaaaaaaagagattttggaaagacttgttaggattgctgaggaagataatgaacgattc
ttgcttcgactcagagaacgtattgatagggttggaattgatataccgacaattgaagta
agatatgaaaatttgaatatcggagcacaagttttagtaggaagcaagggtttaccttcc
gtctttaatttcttcaccaatacaattgagggtttattgaatctcctccacattcttcca
aataagcgaaaaccattcgcaatccttcatgatgtcagtggaattatcaagcccggcagg
atgacattacttttgggccctcctggctctggtaagactacattgctcctggctttagct
ggtaaacttgccaaagatcttgagttttcgggaagggtaacatacaatggacacacaatg
gatgagtttgttccccaacgaacttcggcatatatcagtcagcatgatcttcacattgga
gagatgacagtgagagaaacattggccttctctgccagagttcaaggggttggaaccagc
tatgacatgctcgtggaattgtcgagaagagaaaaggctgccaatattaagcctgatcca
gatattgacatctacatgaaggcagctgcagttgagggacaggaaacaagcgtagttact
gactacattcttaagattttgggactggatgtatgtgctgatacactagtagggaacgag
atgatcaggggtatttctgggggacaaagaaaacggcttacaactggagagatgcttgtt
ggaccagcaaaagcactttttatggatgaaatatcaaccgggttggatagttcaacaaca
tatcagattgtaaattctatccgacaatccatccatatacttaaaggaactgccgttatc
tctcttctccaacctgctcccgagacttatgatctctttgatgacatcatacttctttct
gatggacaagtcgtgtaccaaggaccccgtgaacatgtcctcgagttctttgaattcatg
ggcttcaagtgccctcaaaggaagggagttgctgacttcttacaagaagtaacatcacgg
aaagatcaagaacaatattgggctcggagagatgcaccttatacctttgtgaccgtgaag
caatttgtggaggctttcaagagatttcatgtcggtaggcgacgtgcacaggagcttgcc
gtcccatatgataagtcaaaaagtcaccctgctgccttaacaactgaggaatttggactt
aacaaaaaggaattgcttaaagcatgcttgtctagagaggcactattgatgaagagaaat
tcatttatctatgtttttaagtctgtccaacttgttatcacggcactcattaccgcaaca
ttatttctgagaactcatatgcacaagaattctgtgcaagatgggatggtttacctaggt
gcccttttcttctcacaagtacagattctgttcaacgggttctcggagctgtcattgaca
attataaagctccctgtgttctataagcaaagggatttacggttctacccctcttgggca
tactccttaccatcatggcttctcaaaatcccaatctcaatcgtagaaacagccatatgg
gtgataataacttactatgttatgggctatgactcaaacgtgggaaggttctttaagcag
tacttggtcctcttaggtattcaccagatggcttcggcattgttcagatttaacgcgggg
attggaagaaacatgatattagcaaacacatttggtactggagccctagttacacttctc
gtgttgggtggtttcatattgtcacgagaaactgtgaaaaaatggtggatatggggctac
tggatctctccattgatgtatgggcagacggctctttctgtgaatgaattccttggtcac
agttggaccaataatggcttaggaaaaacagtactggatgctcgtgggatctttgcacat
gcgtattggtattggattggactaggagctcttgtaggatatgttattctgttcaatgtg
atgtacacaatagctttgacatatctaaatccaattgggaagcctcagccaattttgtct
gaagaggatttgcaggagaaacaagctaacttaactggtcaagccattgagctgtcatcg
agaggaagacgatcctctggctctggaagagggggagaaattcaagaagaatctcaacga
aatgggcaaagagggatggttcttcctttccagcctttggctattacctttgatgaaatc
agatattcagtagatatgcctatggaaatgaggtcgcaagtaaatgaggatcgcctggaa
cttcttaagggcgtgagtggcgcatttaggccaggagtgctgacagcactgatgggtgtt
agtggtgctgggaaaacaaccctgatggatgtgttagcagggcggaaaactggtggatat
atagatggagatattaaaatctctgggtatgaaaaaaagcaagaaacatttgctagggtt
tctggatattgtgagcaagcagacattcactctccgcatctcacagtccacgagtccttg
gtcttttcagcatggcttaggttatcctctgacgttgatgcagaagcaagaaagacattt
gtagaggaggtcatggaacttgtagagttggactctctaagatatgcacttataggactt
ccgggagtaaatggtctctcaaccgagcagcgaaagagactaacaatagccgtagaacta
gttgccaacccttctataatattcatggatgagccaacctcagggcttgatgctagggct
gctgccattgtgatgaggacagttaggaacactgtgaacacaggtcgaacagtggtttgc
actatccatcagccaagcattgacatatttgatgcttttgatgagttgctattgcttaag
cgaggtggaacgcaaatatactttggtcctataggccgccacggttgcgaccttatcaag
tactttgagggaattcgtggagttcacaaaatcaaggatggctataatcctgcaacttgg
atgttggaggtaacatcaatggctcaagaaactcaacttggtgttgacttctctgaatta
tacaagaattcagacctctacaggagaaacaaagctactatacaacaacacagtattcca
gctccaggatcaaaggatctatacttccccactcaatattcacagcctgttctgactcaa
tttatggcatgtttgtggaagcaacattgttcgtactggcggaacactatgtacactgca
atgagactttttttcgcaatctttgtgggagtcatgtttgggtctatcttctggaaactc
ggctctacaacgaataagcaacaagctcttctaaatgcaatgggttcaatgtatacggca
gttctatttcttggcattcaaaattcatccggagttcagccagttgtgtttgtcgaaagg
acagttttttaccgagagcgagctgcaggaatgtattccgctcttccctatgctttttca
caggtcttaattgagatgccttactgctttttccaaaccgccttctatggaatcacagtg
tacgccatgatgggattccaatggaccgcggcaaagttcctttactacttgtacttcatg
tacttcaccttgctctacttcacatactatggcatgatgtctgttggcgttacccctaat
cctagcattgctgccattgtttcctctgcgttctatggcatttggcaagttttctccgga
ttccttatcccaagacctagaatgccggtatggtggagatggtactactggctgtgcccc
atttcatggagcttgtacgggttgctagtgtcccaatttggtgatctcgaaatcacagtg
attgatttagagggagatttgaagggactaaatgtgaagcaatacttgcatgcctatttt
ggttatgagcgcgacttcttagggccggttgccggagttattgttgggattaacgttctt
ttcgctttcgtttttgcgtttgctatcaagacctttaactttcagaggaggtga
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